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Part 1: Document Description
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Citation |
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Title: |
Output for Grannot |
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Identification Number: |
doi:10.23708/RRSKRA |
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Distributor: |
DataSuds |
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Date of Distribution: |
2025-02-26 |
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Version: |
3 |
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Bibliographic Citation: |
Marthe, Nina; Sabot, Francois, 2025, "Output for Grannot", https://doi.org/10.23708/RRSKRA, DataSuds, V3 |
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Citation |
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Title: |
Output for Grannot |
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Identification Number: |
doi:10.23708/RRSKRA |
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Authoring Entity: |
Marthe, Nina (Institut de Recherche pour le Développement) |
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Sabot, Francois (Institut de Recherche pour le Développement) |
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Software used in Production: |
GrAnnoT |
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Distributor: |
DataSuds |
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Access Authority: |
SABOT, Francois |
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Depositor: |
SABOT, Francois |
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Date of Deposit: |
2025-02-26 |
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Holdings Information: |
https://doi.org/10.23708/RRSKRA |
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Study Scope |
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Keywords: |
Agricultural Sciences, Computer and Information Science, Medicine, Health and Life Sciences |
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Topic Classification: |
Computer sciences |
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Abstract: |
output data for the GrAnnoT v1 paper |
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Kind of Data: |
Analysis data |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Other Study Description Materials |
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Label: |
grannot_analysis_command_lines.txt |
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Notes: |
text/plain |
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Label: |
readme_outputs.txt |
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Notes: |
text/plain |
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Label: |
liftoff_transfer_k12_to_0127.gff |
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Notes: |
application/octet-stream |
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Label: |
unmapped_features.txt |
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Notes: |
text/plain |
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Label: |
reference_all_genes.fa |
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Notes: |
application/octet-stream |
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Label: |
reference_all_to_target_all.sam |
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Notes: |
application/octet-stream |
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Label: |
O127_H6_E2348_69_193637c.gff |
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Notes: |
application/octet-stream |
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Label: |
liftoff_transfer_chm13_to_grch38.gff |
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Notes: |
application/octet-stream |
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Label: |
unmapped_features.txt |
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Notes: |
text/plain |
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Label: |
GRCh38.gff |
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Notes: |
application/octet-stream |
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Label: |
reference_all_genes.fa |
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Notes: |
application/octet-stream |
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Label: |
reference_all_to_target_all.sam |
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Notes: |
application/octet-stream |
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Label: |
grannot.zip |
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Notes: |
application/zip |
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Label: |
AzucenaRS1.gff |
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Notes: |
application/octet-stream |
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IRGSP.gff |
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Notes: |
application/octet-stream |
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Label: |
AzucenaRS1.gff3 |
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Notes: |
application/octet-stream |
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Label: |
IRGSP.gff3 |
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Notes: |
application/octet-stream |
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Label: |
AzucenaRS1.gff |
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application/octet-stream |
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Label: |
Os117425RS1.gff |
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application/octet-stream |
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Os125619RS1.gff |
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application/octet-stream |
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Os125827RS1.gff |
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application/octet-stream |
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Os127518RS1.gff |
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application/octet-stream |
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Os127564RS1.gff |
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application/octet-stream |
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Os127652RS1.gff |
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application/octet-stream |
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Os127742RS1.gff |
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application/octet-stream |
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Os128077RS1.gff |
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application/octet-stream |
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Os132278RS1.gff |
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application/octet-stream |
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Os132424RS1.gff |
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application/octet-stream |
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OsIR64RS1.gff |
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Notes: |
application/octet-stream |
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PAV_matrix.txt |
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Notes: |
text/plain |
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graphaligner_rice_transfer.gaf |
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Notes: |
application/octet-stream |
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AzucenaRS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
AzucenaRS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
AzucenaRS1_named_unmapped.txt |
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Notes: |
text/plain |
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AzucenaRS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Os117425RS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
Os117425RS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
Os117425RS1_named_unmapped.txt |
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Notes: |
text/plain |
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Os117425RS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Os125619RS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
Os125619RS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
Os125619RS1_named_unmapped.txt |
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Notes: |
text/plain |
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Label: |
Os125619RS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Os125827RS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
Os125827RS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
Os125827RS1_named_unmapped.txt |
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Notes: |
text/plain |
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Label: |
Os125827RS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Os127518RS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
Os127518RS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
Os127518RS1_named_unmapped.txt |
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Notes: |
text/plain |
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Label: |
Os127518RS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Os127564RS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
Os127564RS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
Os127564RS1_named_unmapped.txt |
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Notes: |
text/plain |
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Label: |
Os127564RS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Label: |
Os127652RS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
Os127652RS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
Os127652RS1_named_unmapped.txt |
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Notes: |
text/plain |
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Label: |
Os127652RS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Label: |
Os127742RS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
Os127742RS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
Os127742RS1_named_unmapped.txt |
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Notes: |
text/plain |
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Label: |
Os127742RS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Label: |
Os128077RS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
Os128077RS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
Os128077RS1_named_unmapped.txt |
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Notes: |
text/plain |
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Label: |
Os128077RS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Label: |
Os132278RS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
Os132278RS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
Os132278RS1_named_unmapped.txt |
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Notes: |
text/plain |
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Label: |
Os132278RS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Label: |
Os132424RS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
Os132424RS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
Os132424RS1_named_unmapped.txt |
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Notes: |
text/plain |
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Label: |
Os132424RS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Label: |
OsIR64RS1_named.db.gff |
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Notes: |
application/octet-stream |
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Label: |
OsIR64RS1_named.gff |
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Notes: |
application/octet-stream |
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Label: |
OsIR64RS1_named_unmapped.txt |
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Notes: |
text/plain |
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Label: |
OsIR64RS1_named_unmappeddb.txt |
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Notes: |
text/plain |
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Label: |
odgi_transfer_nb_azu.bed |
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Notes: |
application/vnd.realvnc.bed |
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Label: |
vg_annotation_files.zip |
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Notes: |
application/zip |