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Part 1: Document Description
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Citation |
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Title: |
Global maps of habitat suitability probability for 1,485 European endemic plant species |
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Identification Number: |
doi:10.23708/RNGS8Z |
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Distributor: |
DataSuds |
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Date of Distribution: |
2020-10-26 |
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Version: |
1 |
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Bibliographic Citation: |
POUTEAU, ROBIN; et al., 2020, "Global maps of habitat suitability probability for 1,485 European endemic plant species", https://doi.org/10.23708/RNGS8Z, DataSuds, V1 |
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Citation |
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Title: |
Global maps of habitat suitability probability for 1,485 European endemic plant species |
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Identification Number: |
doi:10.23708/RNGS8Z |
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Authoring Entity: |
POUTEAU, ROBIN (IRD - French National Research Institute for Sustainable Development) |
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et al. (IRD - French National Research Institute for Sustainable Development) |
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Distributor: |
DataSuds |
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Access Authority: |
POUTEAU, ROBIN |
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Depositor: |
POUTEAU, ROBIN |
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Date of Deposit: |
2020-10-16 |
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Holdings Information: |
https://doi.org/10.23708/RNGS8Z |
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Study Scope |
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Keywords: |
Earth and Environmental Sciences, Alien species, Global change, Naturalization, Species distribution model |
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Topic Classification: |
Geography, environment and climatology, Plant sciences |
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Abstract: |
This dataset includes 1,485 raster files (.gri format) representing global maps of habitat suitability probability for the most widespread European endemic plant species. 272 species are already recorded as naturalized outside Europe and 1,213 species are not yet recorded as naturalized outside Europe but might become so in the future depending on their habitat suitability probabilities. The spatial resolution is 0.4166667° × 0.4166667°. The geographic coordinate system is World Geodetic System 1984 (EPSG: 4326). To comprehensively describe the distribution of the species in Europe, we combined occurrence records from six sources: the ‘Global Biodiversity Information Facility’ (GBIF), the ‘European Vegetation Archive’ (EVA), the ‘EU-Forest’ dataset, the ‘Atlas Florae Europaeae’, the ‘Plant Functional Diversity of Grasslands’ network (DIVGRASS) and the digital atlas of the German flora. When several occurrence records from these different sources were duplicated on the same cell, only one occurrence record per species was kept to avoid pseudoreplication. We defined six environmental variables to model and project species expected ranges: annual mean temperature (°C), annual precipitation (mm), precipitation seasonality (yearly coefficient of variation) representing the period 1979-2013 provided by the CHELSA climate database, the percentage of each grid cell with primary land cover based on the Harmonized Global Land Use models, organic carbon content (g per kg) and pH in the first 15 cm of soil from the global gridded soil information database SoilGrids. Environmental variables were aggregated (using the mean value) to the resolution of 0.42° × 0.42°. Six species distribution modelling (SDM) methods including generalized additive models, generalized linear models, generalized boosting trees, maximum entropy, multivariate adaptive regression splines and random forest were used. To combine the predictive capability of the six SDMs, their projections were aggregated into a consensus projection. To ensure the quality of the ensemble SDM, we only kept the projections for which the accuracy estimated by AUC and TSS were higher than 0.8 and 0.6, respectively, and each SDM was weighted proportional to its TSS evaluation. The species distribution modelling workflow was performed within the ‘biomod2’ R platform. |
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Geographic Bounding Box: |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Other Study Description Materials |
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Label: |
Abies.alba.grd |
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Notes: |
application/gridfile |
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Abies.alba.gri |
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Notes: |
application/gridfile |
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Label: |
Abies.cephalonica.grd |
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Notes: |
application/gridfile |
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Label: |
Abies.cephalonica.gri |
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application/gridfile |
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Abies.pinsapo.grd |
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application/gridfile |
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Label: |
Abies.pinsapo.gri |
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application/gridfile |
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Label: |
Acer.heldreichii.grd |
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application/gridfile |
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Label: |
Acer.heldreichii.gri |
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application/gridfile |
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Acer.opalus.grd |
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application/gridfile |
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Label: |
Acer.opalus.gri |
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application/gridfile |
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Label: |
Achillea.ageratifolia.grd |
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application/gridfile |
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Label: |
Achillea.ageratifolia.gri |
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application/gridfile |
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Label: |
Achillea.atrata.grd |
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application/gridfile |
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Label: |
Achillea.atrata.gri |
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application/gridfile |
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Label: |
Achillea.clavennae.grd |
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application/gridfile |
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Achillea.clavennae.gri |
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application/gridfile |
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Achillea.clypeolata.grd |
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application/gridfile |
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Label: |
Achillea.clypeolata.gri |
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application/gridfile |
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Achillea.collina.grd |
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application/gridfile |
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Label: |
Achillea.collina.gri |
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application/gridfile |
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Achillea.crithmifolia.grd |
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application/gridfile |
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Label: |
Achillea.crithmifolia.gri |
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application/gridfile |
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Achillea.distans.grd |
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application/gridfile |
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Label: |
Achillea.distans.gri |
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application/gridfile |
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Achillea.erbarotta.grd |
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application/gridfile |
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Achillea.erbarotta.gri |
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application/gridfile |
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Achillea.fraasii.grd |
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application/gridfile |
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Achillea.fraasii.gri |
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application/gridfile |
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Achillea.grandifolia.grd |
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application/gridfile |
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Label: |
Achillea.grandifolia.gri |
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application/gridfile |
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Label: |
Achillea.holosericea.grd |
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application/gridfile |
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Achillea.holosericea.gri |
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application/gridfile |
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Achillea.nana.grd |
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application/gridfile |
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Label: |
Achillea.nana.gri |
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application/gridfile |
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Achillea.ptarmica.grd |
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application/gridfile |
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Achillea.ptarmica.gri |
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application/gridfile |
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Achillea.roseoalba.grd |
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application/gridfile |
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Achillea.roseoalba.gri |
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application/gridfile |
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Achillea.tomentosa.grd |
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application/gridfile |
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Achillea.tomentosa.gri |
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application/gridfile |
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Achillea.umbellata.grd |
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application/gridfile |
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Achillea.umbellata.gri |
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application/gridfile |
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Aconitum.lasiostomum.grd |
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application/gridfile |
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Label: |
Aconitum.lasiostomum.gri |
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application/gridfile |
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Label: |
Aconitum.napellus.grd |
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application/gridfile |
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Label: |
Aconitum.napellus.gri |
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application/gridfile |
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Label: |
Aconitum.toxicum.grd |
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Notes: |
application/gridfile |
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Label: |
Aconitum.toxicum.gri |
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application/gridfile |
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Label: |
Adenocarpus.complicatus.grd |
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application/gridfile |
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Label: |
Adenocarpus.complicatus.gri |
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application/gridfile |
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Label: |
Adenocarpus.hispanicus.grd |
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application/gridfile |
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Label: |
Adenocarpus.hispanicus.gri |
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application/gridfile |
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Label: |
Adenostyles.alliariae.grd |
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application/gridfile |
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Label: |
Adenostyles.alliariae.gri |
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application/gridfile |
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Label: |
Adenostyles.alpina.grd |
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Notes: |
application/gridfile |
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Label: |
Adenostyles.alpina.gri |
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application/gridfile |
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Label: |
Adenostyles.leucophylla.grd |
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application/gridfile |
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Label: |
Adenostyles.leucophylla.gri |
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application/gridfile |
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Label: |
Adonis.pyrenaica.grd |
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Notes: |
application/gridfile |
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Label: |
Adonis.pyrenaica.gri |
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application/gridfile |
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Label: |
Aesculus.hippocastanum.grd |
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application/gridfile |
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Label: |
Aesculus.hippocastanum.gri |
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application/gridfile |
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Aethionema.thomasianum.grd |
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Notes: |
application/gridfile |
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Label: |
Aethionema.thomasianum.gri |
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Notes: |
application/gridfile |
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Label: |
Agrostis.agrostiflora.grd |
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Notes: |
application/gridfile |
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Label: |
Agrostis.agrostiflora.gri |
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application/gridfile |
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Label: |
Agrostis.alpina.grd |
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Notes: |
application/gridfile |
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Label: |
Agrostis.alpina.gri |
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Notes: |
application/gridfile |
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Label: |
Agrostis.curtisii.grd |
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Notes: |
application/gridfile |
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Label: |
Agrostis.curtisii.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.alpina.grd |
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application/gridfile |
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Label: |
Alchemilla.alpina.gri |
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application/gridfile |
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Label: |
Alchemilla.colorata.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.colorata.gri |
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application/gridfile |
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Label: |
Alchemilla.conjuncta.grd |
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application/gridfile |
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Label: |
Alchemilla.conjuncta.gri |
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application/gridfile |
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Label: |
Alchemilla.connivens.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.connivens.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.coriacea.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.coriacea.gri |
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application/gridfile |
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Label: |
Alchemilla.decumbens.grd |
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application/gridfile |
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Label: |
Alchemilla.decumbens.gri |
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application/gridfile |
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Label: |
Alchemilla.exigua.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.exigua.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.filicaulis.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.filicaulis.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.fissa.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.fissa.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.flabellata.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.flabellata.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.fulgens.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.fulgens.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.glabra.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.glabra.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.glaucescens.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.glaucescens.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.hoppeana.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.hoppeana.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.incisa.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.incisa.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.lineata.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.lineata.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.obtusa.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.obtusa.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.pallens.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.pallens.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.pentaphyllea.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.pentaphyllea.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.propinqua.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.propinqua.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.reniformis.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.reniformis.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.sarmatica.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.sarmatica.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.saxatilis.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.saxatilis.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.splendens.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.splendens.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.strigosula.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.strigosula.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.subglobosa.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.subglobosa.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.transiens.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.transiens.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.trunciloba.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.trunciloba.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.undulata.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.undulata.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.vetteri.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.vetteri.gri |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.xanthochlora.grd |
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Notes: |
application/gridfile |
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Label: |
Alchemilla.xanthochlora.gri |
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Notes: |
application/gridfile |
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Label: |
Allium.ericetorum.grd |
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Notes: |
application/gridfile |
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Label: |
Allium.ericetorum.gri |
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Notes: |
application/gridfile |
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Label: |
Allium.flavum.grd |
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Notes: |
application/gridfile |
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Label: |
Allium.flavum.gri |
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Notes: |
application/gridfile |
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Label: |
Allium.moly.grd |
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Notes: |
application/gridfile |
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Label: |
Allium.moly.gri |
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Notes: |
application/gridfile |
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Label: |
Allium.moschatum.grd |
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Notes: |
application/gridfile |
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Label: |
Allium.moschatum.gri |
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Notes: |
application/gridfile |
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Label: |
Allium.narcissiflorum.grd |
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Notes: |
application/gridfile |
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Label: |
Allium.narcissiflorum.gri |
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Notes: |
application/gridfile |
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Label: |
Allium.pendulinum.grd |
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Notes: |
application/gridfile |
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Label: |
Allium.pendulinum.gri |
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Notes: |
application/gridfile |
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Label: |
Allium.podolicum.grd |
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Notes: |
application/gridfile |
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Label: |
Allium.podolicum.gri |
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Notes: |
application/gridfile |
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Label: |
Allium.rubrovittatum.grd |
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Notes: |
application/gridfile |
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Label: |
Allium.rubrovittatum.gri |
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Notes: |
application/gridfile |
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Label: |
Allium.suaveolens.grd |
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Notes: |
application/gridfile |
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Label: |
Allium.suaveolens.gri |
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Notes: |
application/gridfile |
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Label: |
Alnus.cordata.grd |
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Notes: |
application/gridfile |
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Label: |
Alnus.cordata.gri |
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Notes: |
application/gridfile |
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Label: |
Alyssum.alpestre.grd |
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Notes: |
application/gridfile |
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Label: |
Alyssum.alpestre.gri |
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Notes: |
application/gridfile |
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Label: |
Alyssum.bertolonii.grd |
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Notes: |
application/gridfile |
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Label: |
Alyssum.bertolonii.gri |
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Notes: |
application/gridfile |
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Label: |
Alyssum.corymbosoides.grd |
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Notes: |
application/gridfile |
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Label: |
Alyssum.corymbosoides.gri |
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Notes: |
application/gridfile |
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Label: |
Alyssum.cuneifolium.grd |
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Notes: |
application/gridfile |
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Label: |
Alyssum.cuneifolium.gri |
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Notes: |
application/gridfile |
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Label: |
Alyssum.heldreichii.grd |
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Notes: |
application/gridfile |
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Label: |
Alyssum.heldreichii.gri |
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Notes: |
application/gridfile |
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Label: |
Alyssum.montanum.grd |
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Notes: |
application/gridfile |
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Label: |
Alyssum.montanum.gri |
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Notes: |
application/gridfile |
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Label: |
Alyssum.scardicum.grd |
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Notes: |
application/gridfile |
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Label: |
Alyssum.scardicum.gri |
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Notes: |
application/gridfile |
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Label: |
Alyssum.stribrnyi.grd |
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Notes: |
application/gridfile |
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Label: |
Alyssum.stribrnyi.gri |
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Notes: |
application/gridfile |
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Label: |
Ammi.majus.grd |
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Notes: |
application/gridfile |
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Label: |
Ammi.majus.gri |
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Notes: |
application/gridfile |
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Label: |
Anarrhinum.bellidifolium.grd |
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Notes: |
application/gridfile |
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Label: |
Anarrhinum.bellidifolium.gri |
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Notes: |
application/gridfile |
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Label: |
Anarrhinum.duriminium.grd |
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Notes: |
application/gridfile |
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Label: |
Anarrhinum.duriminium.gri |
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Notes: |
application/gridfile |
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Label: |
Androsace.helvetica.grd |
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Notes: |
application/gridfile |
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Label: |
Androsace.helvetica.gri |
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Notes: |
application/gridfile |
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Label: |
Androsace.lactea.grd |
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Notes: |
application/gridfile |
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Label: |
Androsace.lactea.gri |
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Notes: |
application/gridfile |
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Label: |
Androsace.obtusifolia.grd |
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Notes: |
application/gridfile |
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Label: |
Androsace.obtusifolia.gri |
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Notes: |
application/gridfile |
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Label: |
Androsace.vandellii.grd |
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Notes: |
application/gridfile |
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Label: |
Androsace.vandellii.gri |
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Notes: |
application/gridfile |
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Label: |
Andryala.agardhii.grd |
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Notes: |
application/gridfile |
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Label: |
Andryala.agardhii.gri |
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Notes: |
application/gridfile |
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Label: |
Anemone.hortensis.grd |
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Notes: |
application/gridfile |
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Label: |
Anemone.hortensis.gri |
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Notes: |
application/gridfile |
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Label: |
Anemone.pavoniana.grd |
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Notes: |
application/gridfile |
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Label: |
Anemone.pavoniana.gri |
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Notes: |
application/gridfile |
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Label: |
Anemone.trifolia.grd |
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Notes: |
application/gridfile |
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Label: |
Anemone.trifolia.gri |
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Notes: |
application/gridfile |
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Label: |
Antennaria.alpina.grd |
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Notes: |
application/gridfile |
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Label: |
Antennaria.alpina.gri |
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Notes: |
application/gridfile |
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Label: |
Antennaria.carpatica.grd |
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Notes: |
application/gridfile |
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Label: |
Antennaria.carpatica.gri |
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Notes: |
application/gridfile |
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Label: |
Anthyllis.barbajovis.grd |
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Notes: |
application/gridfile |
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Label: |
Anthyllis.barbajovis.gri |
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Notes: |
application/gridfile |
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Trifolium.rubens.grd |
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Trifolium.thalii.grd |
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Trinia.dalechampii.grd |
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Trisetum.baregense.grd |
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Trisetum.distichophyllum.grd |
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Trisetum.hispidum.grd |
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Trochiscanthes.nodiflorus.grd |
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Ulex.gallii.grd |
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Ulex.genistoides.grd |
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Ulex.minor.grd |
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Urtica.atrovirens.grd |
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Valeriana.asarifolia.grd |
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Vella.spinosa.grd |
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Verbascum.arcturus.grd |
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Vicia.oroboides.grd |
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Viola.calcarata.grd |
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Vitaliana.primuliflora.grd |
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