Genetic data (15 microsatellite markers) of native and invasive Tapinoma ant populations (doi:10.23708/V2AMCA)

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Part 2: Study Description
Part 3: Data Files Description
Part 4: Variable Description
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Genetic data (15 microsatellite markers) of native and invasive Tapinoma ant populations

doi:10.23708/V2AMCA

DataSuds

2024-12-02

1

Destour, Giovanny; Kaufmann, Bernard; Centanni, Julia; Abdelli, Zaynab; Doums, Claudie; Dumet, Adeline; Gippet, Jérôme; Gomel, Luc; Lucas, Annick; Tauru, Hugo; Vergnes, Alan; Blatrix, Rumsais; Javal, Marion, 2024, "Genetic data (15 microsatellite markers) of native and invasive Tapinoma ant populations", https://doi.org/10.23708/V2AMCA, DataSuds, V1, UNF:6:q5eEgEKfpcGXc1406S53nA== [fileUNF]

Genetic data (15 microsatellite markers) of native and invasive Tapinoma ant populations

doi:10.23708/V2AMCA

Destour, Giovanny (UMR CEFE - CNRS, EPHE, IRD, Univ. Montpellier - France)

Kaufmann, Bernard (UMR LEHNA - Univ. Claude Bernard Lyon 1, ENTPE, CNRS, INRAE - France)

Centanni, Julia (UMR CEFE - CNRS, EPHE, IRD, Univ. Montpellier - France)

Abdelli, Zaynab (Ville de Montpellier - France)

Doums, Claudie (École Pratique des Hautes Études - France)

Dumet, Adeline (UMR LEHNA - Univ. Claude Bernard Lyon 1, ENTPE, CNRS, INRAE - France)

Gippet, Jérôme (University of Lausanne - Switzerland)

Gomel, Luc (Direction de la transition écologique et sociétale, Univ. Paul Valéry Montpellier 3 - France)

Lucas, Annick (UMR CEFE - CNRS, EPHE, IRD, Univ. Montpellier - France)

Tauru, Hugo (UMR LEHNA - Univ. Claude Bernard Lyon 1, ENTPE, CNRS, INRAE - France)

Vergnes, Alan (UMR CEFE - CNRS, EPHE, IRD, Univ. Montpellier - France)

Blatrix, Rumsais (UMR CEFE - CNRS, EPHE, IRD, Univ. Montpellier - France)

Javal, Marion (UMR CBGP - INRAE, IRD, CIRAD, L'Institut Agro Montpellier - France)

ANR-10-LABX-0088

DataSuds

Javal, Marion

Javal, Marion

2024-06-18

https://doi.org/10.23708/V2AMCA

Earth and Environmental Sciences, Biological invasion, microsatellites, plant trade, Tapinoma, ant

Zoology, Ecosystems and natural habitat

<p>The ants from the <a href="https://www.antwiki.org/wiki/Tapinoma_nigerrimum_complex">Tapinoma nigerrimun complex</a> comprise four species, three of which (<i>T. darioi</i>, <i>T. ibericum</i>,<i> T. magnum</i>) exhibit biological and ecological characteristics of invasive ant species.</p> <p>The trade in ornamental plants is a common invasion pathway for many taxa, but its role in the continental spread of invasive <i>Tapinoma</i> species remains unknown.</p> <p>This dataset was gathered to identify the role of ornamental plant sales outlets (OPSOs) in the introduction of these three species and to determine the geographical origin of populations present in French OPSOs. <i>Tapinoma</i> colonies were sampled from 103 OPSOs across five French urban areas, with a specific focus on the Mediterranean region. Collected ant workers were identified to the species level using 15 microsatellite markers.</p>

France, Italy, Spain, Morocco, Algeria, Germany, Switzerland

Data Type: Experimental data

Giovanny Destour, Bernard Kaufmann, Julia Centanni, Zaynab Abdelli, Claudie Doums, et al.. Genetic tracing reveals the role of ornamental plant trade in the simultaneous spread of three invasive ant species in Western Europe. 2024. ⟨hal-04617939⟩

Giovanny Destour, Bernard Kaufmann, Julia Centanni, Zaynab Abdelli, Claudie Doums, et al.. Genetic tracing reveals the role of ornamental plant trade in the simultaneous spread of three invasive ant species in Western Europe. 2024. ⟨hal-04617939⟩

• Number of cases: 486

• No. of variables per record: 33

• Type of File: text/tab-separated-values

UNF:6:bekGsslJcCIb9dzyR0FMPA==

• Number of cases: 223

• No. of variables per record: 34

• Type of File: text/tab-separated-values

UNF:6:iGyQgJ4MfJLepbLuY3Tx+g==

• Species - Species
• F08_all1 - F08_all1
• F08_all2 - F08_all2
• H05_all1 - H05_all1
• H05_all2 - H05_all2
• B01_all1 - B01_all1
• B01_all2 - B01_all2
• H09_all1 - H09_all1
• H09_all2 - H09_all2
• D05_all1 - D05_all1
• D05_all2 - D05_all2
• F10_all1 - F10_all1
• F10_all2 - F10_all2
• A11_all1 - A11_all1
• A11_all2 - A11_all2
• F12_all1 - F12_all1
• F12_all2 - F12_all2
• B10_all1 - B10_all1
• B10_all2 - B10_all2
• C03_all1 - C03_all1
• C03_all2 - C03_all2
• A09_all1 - A09_all1
• A09_all2 - A09_all2
• A10_all1 - A10_all1
• A10_all2 - A10_all2
• B03_all1 - B03_all1
• B03_all2 - B03_all2
• A03_all1 - A03_all1
• A03_all2 - A03_all2
• E11_all1 - E11_all1
• E11_all2 - E11_all2
• Latitude - Latitude
• Longitude - Longitude
• Species - Species
• F08_all1 - F08_all1
• F08_all2 - F08_all2
• H05_all1 - H05_all1
• H05_all2 - H05_all2
• B01_all1 - B01_all1
• B01_all2 - B01_all2
• H09_all1 - H09_all1
• H09_all2 - H09_all2
• D05_all1 - D05_all1
• D05_all2 - D05_all2
• F10_all1 - F10_all1
• F10_all2 - F10_all2
• A11_all1 - A11_all1
• A11_all2 - A11_all2
• F12_all1 - F12_all1
• F12_all2 - F12_all2
• B10_all1 - B10_all1
• B10_all2 - B10_all2
• C03_all1 - C03_all1
• C03_all2 - C03_all2
• A09_all1 - A09_all1
• A09_all2 - A09_all2
• A10_all1 - A10_all1
• A10_all2 - A10_all2
• B03_all1 - B03_all1
• B03_all2 - B03_all2
• A03_all1 - A03_all1
• A03_all2 - A03_all2
• E11_all1 - E11_all1
• E11_all2 - E11_all2
• Locality - Locality
• OPSO number - OPSO number
• Perimeter - Perimeter

f44987 Location:

Variable Format: character

Notes: UNF:6:haWW9gz3xg8taMXhNxhf9w==

f44987 Location:

Summary Statistics: Valid 486.0; Max. 168.0; Mean 133.68106995884773; StDev 18.903311543389297; Min. -9.0;

Variable Format: numeric

Notes: UNF:6:Jfhi0YEtGsc5uUgEdb6s7A==

f44987 Location:

Summary Statistics: StDev 21.097296277690933; Valid 486.0; Mean 139.59053497942386; Max. 176.0; Min. -9.0;

Variable Format: numeric

Notes: UNF:6:+P2W9F3Pwd0Sn/tvY+EoHQ==

f44987 Location:

Summary Statistics: StDev 14.672847026482028; Min. -9.0; Max. 160.0; Mean 124.01851851851852; Valid 486.0;

Variable Format: numeric

Notes: UNF:6:3vLvYnfdgRDsz2Trypen0w==

f44987 Location:

Summary Statistics: Mean 125.50823045267491; Valid 486.0; Min. -9.0; Max. 166.0; StDev 15.653955534386602

Variable Format: numeric

Notes: UNF:6:QpbCfzoufEyK616IWkYnhQ==

f44987 Location:

Summary Statistics: Mean 227.02880658436214; StDev 26.78003552070735; Max. 247.0; Min. -9.0; Valid 486.0

Variable Format: numeric

Notes: UNF:6:evOwKNPo59K2tc7o1qRyRw==

f44987 Location:

Summary Statistics: Mean 228.33333333333331; Max. 247.0; Min. -9.0; Valid 486.0; StDev 26.89636467981665;

Variable Format: numeric

Notes: UNF:6:nGd2J0+3JxC2KdDGcW7qhQ==

f44987 Location:

Summary Statistics: Max. 172.0; Mean 148.68930041152265; Valid 486.0; Min. -9.0; StDev 15.0594755157189

Variable Format: numeric

Notes: UNF:6:BnxFpMZ4jd5rCHj4a3HCWg==

f44987 Location:

Summary Statistics: Mean 153.36831275720164; Valid 486.0; StDev 15.756201333008892; Min. -9.0; Max. 174.0;

Variable Format: numeric

Notes: UNF:6:UIlY0v9SMe224b5PElewGw==

f44987 Location:

Summary Statistics: Valid 486.0; StDev 20.23311441698111; Mean 119.88683127572017; Min. -9.0; Max. 138.0;

Variable Format: numeric

Notes: UNF:6:Mydik6Ravw6aGhSKJL0+kA==

f44987 Location:

Summary Statistics: Min. -9.0; Max. 140.0; StDev 20.411871328027765; Valid 486.0; Mean 120.61934156378598

Variable Format: numeric

Notes: UNF:6:noQ3Ou4TnuLs+hFONZakhQ==

f44987 Location:

Summary Statistics: Max. 148.0; Min. -9.0; StDev 17.941529274270398; Valid 486.0; Mean 132.9320987654321;

Variable Format: numeric

Notes: UNF:6:1yxGui25XjhukD81Ir+jTg==

f44987 Location:

Summary Statistics: Min. -9.0; Max. 148.0; Valid 486.0; StDev 18.046741761605812; Mean 133.78806584362138;

Variable Format: numeric

Notes: UNF:6:tgVueLs4lk2BaB0KpHROmg==

f44987 Location:

Summary Statistics: Valid 486.0; Mean 185.12345679012347; StDev 26.829149887688676; Max. 207.0; Min. -9.0;

Variable Format: numeric

Notes: UNF:6:zGGr1mwhWb9w+l/bQoNPUw==

f44987 Location:

Summary Statistics: StDev 27.043197946502776; Valid 486.0; Max. 207.0; Mean 186.0987654320988; Min. -9.0

Variable Format: numeric

Notes: UNF:6:ZwJPGQBO6BvBjHyjnVB6Vw==

f44987 Location:

Summary Statistics: StDev 24.908456212100635; Max. 206.0; Mean 181.35390946502056; Valid 486.0; Min. -9.0

Variable Format: numeric

Notes: UNF:6:X+GieokJXL5zitVBYm/8bw==

f44987 Location:

Summary Statistics: Max. 222.0; Mean 185.08847736625518; Valid 486.0; Min. -9.0; StDev 25.18251706887593

Variable Format: numeric

Notes: UNF:6:GEnx+v+yZi6HxPkkPLhJJg==

f44987 Location:

Summary Statistics: StDev 28.466072879185887; Valid 486.0; Max. 303.0; Min. -9.0; Mean 244.06584362139913

Variable Format: numeric

Notes: UNF:6:LoQn/2QzQ/1qk2NSQiFZkg==

f44987 Location:

Summary Statistics: Mean 246.98765432098773; Max. 303.0; Min. -9.0; StDev 29.79199110277611; Valid 486.0

Variable Format: numeric

Notes: UNF:6:/yqpmF+EcdkJwxdU6q5K+Q==

f44987 Location:

Summary Statistics: Min. -9.0; Max. 220.0; Mean 175.99794238683128; Valid 486.0; StDev 19.89316817622063

Variable Format: numeric

Notes: UNF:6:Z+199es5M9p5Liva553tYw==

f44987 Location:

Summary Statistics: Valid 486.0; Max. 222.0; Mean 177.69341563786008; StDev 20.509958301919383; Min. -9.0

Variable Format: numeric

Notes: UNF:6:AtB61UsS1JM+cCHftzLXvg==

f44987 Location:

Summary Statistics: Max. 138.0; Valid 486.0; Min. -9.0; StDev 12.535830112632617; Mean 112.23868312757202;

Variable Format: numeric

Notes: UNF:6:z4FTReuDJivSWdi/l0mnKw==

f44987 Location:

Summary Statistics: Max. 152.0; Min. -9.0; StDev 13.695777611426646; Valid 486.0; Mean 114.11522633744855;

Variable Format: numeric

Notes: UNF:6:dbIyD01aZDKu7Eivg7RKww==

f44987 Location:

Summary Statistics: Max. 143.0; StDev 13.396442855326148; Valid 486.0; Mean 133.08641975308643; Min. -9.0;

Variable Format: numeric

Notes: UNF:6:APkWQT3zTVXXKV4sDJzrtA==

f44987 Location:

Summary Statistics: Valid 486.0; Mean 134.85185185185185; Max. 157.0; Min. -9.0; StDev 13.560200507392505

Variable Format: numeric

Notes: UNF:6:/oZAeLT0zgrWtdlTqE/lIg==

f44987 Location:

Summary Statistics: Min. -9.0; Valid 486.0; Mean 121.22839506172839; Max. 146.0; StDev 11.231550567063888;

Variable Format: numeric

Notes: UNF:6:XyiqfB2kbzYTuwRdKrox2w==

f44987 Location:

Summary Statistics: StDev 11.583566844054635; Max. 148.0; Min. -9.0; Valid 486.0; Mean 123.17078189300412;

Variable Format: numeric

Notes: UNF:6:m7ZvoIW+uWH67JGKyGp7+A==

f44987 Location:

Summary Statistics: Max. 302.0; Min. -9.0; Valid 486.0; Mean 247.8477366255144; StDev 38.93485790156453;

Variable Format: numeric

Notes: UNF:6:0m5/F0TVhtmf2W7JKIlXFg==

f44987 Location:

Summary Statistics: Mean 248.43621399176953; Max. 302.0; StDev 39.3454047051209; Valid 486.0; Min. -9.0;

Variable Format: numeric

Notes: UNF:6:gZbtbLjP1YwNUrDts5AuIw==

f44987 Location:

Summary Statistics: Max. 223.0; Valid 486.0; Min. -9.0; StDev 16.230278823918347; Mean 169.0946502057613

Variable Format: numeric

Notes: UNF:6:EwI9twBpMTns21PqPSN6SQ==

f44987 Location:

Summary Statistics: Max. 239.0; StDev 17.56143516120768; Mean 171.7201646090535; Valid 486.0; Min. -9.0

Variable Format: numeric

Notes: UNF:6:6yHbGv/i0oZZkDAmOuQE/g==

f44987 Location:

Summary Statistics: StDev 3.2544411652619227; Min. 30.41602; Max. 51.9585; Valid 486.0; Mean 41.665506573466246

Variable Format: numeric

Notes: UNF:6:cNT2PFijsCEVvUVEyTgXUw==

f44987 Location:

Summary Statistics: Max. 18.44525; Valid 425.0; Min. -9.77112; Mean 4.465636085972719; StDev 5.838626460536271

Variable Format: numeric

Notes: UNF:6:g9/1e9IvU7F+/ZF5Y/Cdig==

f45020 Location:

Variable Format: character

Notes: UNF:6:edRnY7H0ujHc1TQEEma/Dg==

f45020 Location:

Summary Statistics: StDev 20.147420562608662; Max. 182.0; Min. -9.0; Mean 129.2017937219731; Valid 223.0

Variable Format: numeric

Notes: UNF:6:nwjLlL7HwjxVgNrXdx0kkg==

f45020 Location:

Summary Statistics: Mean 135.1390134529148; Valid 223.0; Min. -9.0; StDev 23.39079384843916; Max. 186.0

Variable Format: numeric

Notes: UNF:6:rEl00FPtgCu+OxnPnx6L1Q==

f45020 Location:

Summary Statistics: StDev 15.957144764463841; Max. 140.0; Mean 123.13452914798208; Min. -9.0; Valid 223.0;

Variable Format: numeric

Notes: UNF:6:GCLg1nkWM+1Ua8XYRX68fQ==

f45020 Location:

Summary Statistics: Mean 124.0493273542601; Min. -9.0; Max. 140.0; StDev 16.234550160533537; Valid 223.0;

Variable Format: numeric

Notes: UNF:6:3GxdORUEYuDqjTUi5rUTRg==

f45020 Location:

Summary Statistics: Max. 243.0; Min. -9.0; StDev 32.02557253960201; Valid 223.0; Mean 225.60089686098655

Variable Format: numeric

Notes: UNF:6:p5bARE9cf3+tUQufx3HWhw==

f45020 Location:

Summary Statistics: Max. 243.0; StDev 32.14746302060513; Min. -9.0; Mean 227.00896860986546; Valid 223.0

Variable Format: numeric

Notes: UNF:6:eC1jcJLKOi6NuxbmJoJ0yg==

f45020 Location:

Summary Statistics: Max. 170.0; StDev 19.529996341012186; Mean 145.14349775784754; Min. -9.0; Valid 223.0

Variable Format: numeric

Notes: UNF:6:LL+qv/PKQ5crZNgK1hpcpQ==

f45020 Location:

Summary Statistics: Mean 149.9506726457399; Min. -9.0; StDev 20.337518849872836; Max. 170.0; Valid 223.0

Variable Format: numeric

Notes: UNF:6:nB0jpFQX3BtUWKbkuDx0sQ==

f45020 Location:

Summary Statistics: Valid 223.0; StDev 13.184538701081328; Min. -9.0; Mean 121.65022421524664; Max. 130.0

Variable Format: numeric

Notes: UNF:6:vq10knpmKZ2LiPzdisZNYQ==

f45020 Location:

Summary Statistics: StDev 13.200119789038135; Mean 122.00896860986548; Max. 132.0; Valid 223.0; Min. -9.0

Variable Format: numeric

Notes: UNF:6:JRboOwdf2Vxv8TZzl2mW+Q==

f45020 Location:

Summary Statistics: StDev 17.41812573466482; Max. 144.0; Min. -9.0; Mean 132.82062780269058; Valid 223.0

Variable Format: numeric

Notes: UNF:6:bQNJc1k4CfDgUe1YdXRefA==

f45020 Location:

Summary Statistics: StDev 17.44474340412217; Max. 144.0; Mean 133.38565022421523; Valid 223.0; Min. -9.0;

Variable Format: numeric

Notes: UNF:6:gx/IUVMg9xbdBWNDG4jiag==

f45020 Location:

Summary Statistics: StDev 26.513221513814592; Max. 195.0; Min. -9.0; Mean 185.6726457399103; Valid 223.0

Variable Format: numeric

Notes: UNF:6:RupWIZYSYvDVcOGDqyBnxA==

f45020 Location:

Summary Statistics: Min. -9.0; StDev 26.620312800747932; Mean 186.27354260089686; Valid 223.0; Max. 203.0;

Variable Format: numeric

Notes: UNF:6:jOFVTglgVupsftgZfcejaQ==

f45020 Location:

Summary Statistics: Min. -9.0; Valid 223.0; StDev 30.19265293674311; Mean 176.57847533632287; Max. 212.0

Variable Format: numeric

Notes: UNF:6:56Rf/P5j3Aw+HS2k+JWsPQ==

f45020 Location:

Summary Statistics: Max. 212.0; Valid 223.0; StDev 30.498242752204717; Mean 179.92376681614348; Min. -9.0;

Variable Format: numeric

Notes: UNF:6:RVRiV8TIYPW2PJdgNe4Yew==

f45020 Location:

Summary Statistics: Valid 223.0; StDev 36.784112066174856; Mean 238.50672645739914; Min. -9.0; Max. 273.0

Variable Format: numeric

Notes: UNF:6:VsUaSzmxjwzfAF0U0ZkUcA==

f45020 Location:

Summary Statistics: Mean 240.61434977578472; Max. 273.0; Valid 223.0; StDev 37.8476577685039; Min. -9.0

Variable Format: numeric

Notes: UNF:6:7WLqFVBE6qaJ0FaqVok/TQ==

f45020 Location:

Summary Statistics: Valid 223.0; Min. -9.0; Mean 174.29596412556054; StDev 24.897308582040313; Max. 182.0

Variable Format: numeric

Notes: UNF:6:0NY3JMWggyQ84TW3FAnX1w==

f45020 Location:

Summary Statistics: Min. -9.0; StDev 25.241817597662433; Mean 175.55156950672645; Valid 223.0; Max. 220.0

Variable Format: numeric

Notes: UNF:6:INdMO8/6z3ze2BYjd9537g==

f45020 Location:

Summary Statistics: Min. 108.0; Valid 223.0; Max. 138.0; StDev 5.977887855669726; Mean 113.28251121076234;

Variable Format: numeric

Notes: UNF:6:uBWiDKEC2c1zbpi4CydgHg==

f45020 Location:

Summary Statistics: Mean 114.40358744394618; Min. 108.0; Valid 223.0; Max. 140.0; StDev 6.722182295952837

Variable Format: numeric

Notes: UNF:6:veYx3QmqvAhtQWYTw8iz6A==

f45020 Location:

Summary Statistics: Min. -9.0; Valid 223.0; StDev 9.918465326337829; Max. 143.0; Mean 134.18385650224215

Variable Format: numeric

Notes: UNF:6:Fg9M1PHWYzEVcUgP68NTFw==

f45020 Location:

Summary Statistics: StDev 9.959583821718205; Max. 143.0; Valid 223.0; Min. -9.0; Mean 135.26008968609867

Variable Format: numeric

Notes: UNF:6:z7U3oAeyIsrsKv09k0dsGg==

f45020 Location:

Summary Statistics: StDev 9.083076711754083; Max. 128.0; Mean 120.15695067264573; Min. -9.0; Valid 223.0

Variable Format: numeric

Notes: UNF:6:BgRG4j7jWrZtsQCdpFLZSQ==

f45020 Location:

Summary Statistics: StDev 9.689563972739984; Mean 122.39013452914799; Valid 223.0; Max. 156.0; Min. -9.0;

Variable Format: numeric

Notes: UNF:6:c3iao6XTss6FR7trUYJqIQ==

f45020 Location:

Summary Statistics: Max. 292.0; Min. -9.0; Mean 247.0493273542601; Valid 223.0; StDev 24.898031453635518

Variable Format: numeric

Notes: UNF:6:S4RCJbrcfmOMd9ZgNGrOHQ==

f45020 Location:

Summary Statistics: Max. 302.0; StDev 25.167768990678734; Min. -9.0; Mean 247.8744394618834; Valid 223.0

Variable Format: numeric

Notes: UNF:6:hZwAxikSwL8nusfPNJB/UA==

f45020 Location:

Summary Statistics: Min. -9.0; Max. 191.0; StDev 12.990336351481547; Mean 170.05829596412556; Valid 223.0

Variable Format: numeric

Notes: UNF:6:8u/cTnht3O3JNHQuAPtl2A==

f45020 Location:

Summary Statistics: Valid 223.0; Max. 197.0; StDev 13.753959923092411; Min. -9.0; Mean 172.29147982062779

Variable Format: numeric

Notes: UNF:6:V1Xnh+FR2KchBmaNfFsicQ==

f45020 Location:

Variable Format: character

Notes: UNF:6:OQPyPUngKofJDeUyIv4xPQ==

f45020 Location:

Variable Format: character

Notes: UNF:6:+1M9KVm/Cj54wfgDCmj5JQ==

f45020 Location:

Variable Format: character

Notes: UNF:6:WABkhJxf44mvwJSSBO97qQ==

Label:

Genetic_Tapinoma_data_dictionary.pdf

Text:

Data dictionary

application/pdf

Label:

ReadMe.txt

Text:

Dataset citation, description and terms of use

text/plain