Escherichia coli concentrations and physico-chemical measurements at the outlet of 29 catchments of the Mekong river basin, Lao PDR, during dry and rainy seasons (2016)

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Ribolzi, Olivier; Zimmermann, Rosalie; Thammahacksa, Chanthamousone; Rattanavong, Sayaphet; Oliva, Priscia; Sengtaheuanghoung, Oloth; Pierret, Alain, 2021, "Escherichia coli concentrations and physico-chemical measurements at the outlet of 29 catchments of the Mekong river basin, Lao PDR, during dry and rainy seasons (2016)", https://doi.org/10.23708/ZRSBM4, DataSuds, V1, UNF:6:G4O6skEUv/MJXWZSMwhBSA== [fileUNF]

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Description	This dataset has been collected thanks to the long-term partnership with Department of Agricultural Land Management (DALaM), Lao PDR, which granted the permission for field access, and to the financial, scientific, technical, and/or logistical support of the Multiscale TROPIcal CatchmentS (SNO M-TROPICS; https://mtropics.obs-mip.fr/) critical zone observatory (previously MSEC). This .csv dataset includes Escherichia coli concentrations (MPN 100 mL-1) with upper and lower limits of the confidence interval, and physico-chemical measurements in stream water. Physico-chemical measurements include temperature (°C), electrical conductance (µS cm-1) at 25 °C, dissolved oxygen concentration (mg L-1) and saturation (%), pH (-), oxidation-reduction potential (mV), turbidity (NTU), suspended sediment concentration (g L-1). All variables were measured at the outlet of 29 catchments of the Mekong river basin, in Lao PDR, during both dry and rainy seasons of 2016. The authors acknowledge the financial support of the Institut de Recherche pour le Développement (IRD), including through the regional pilot program Soils, Waters, Coastal Zones and Societies in Southern and Southeast Asia (SELTAR-RPP), the French National Research Agency (TecItEasy project, ANR-13-AGRO-0007), the US Defence Threat Reduction Agency Cooperative Biological Engagement Programme (contract HDTRA-16-C-0017), the Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit funded by the Wellcome Trust of Great Britain (Grant number 089275/H/09/Z), the Lee Ka Shing Foundation of the University of Oxford (grant SM40), and the Nam Theun 2 Power Company (NTPC).
Subject	Agricultural Sciences; Earth and Environmental Sciences; Medicine, Health and Life Sciences
Keyword	Escherichia coli concentration, temperature, electrical conductance, dissolved oxygen concentration, dissolved oxygen saturation, pH, oxidation-reduction potential, turbidity, suspended sediment concentration, M-TROPICS CZO
Related Publication	Ribolzi, O., Rochelle-Newall, E., Dittrich, S., Auda, Y., Newton, P.N., Rattanavong, S., Knappik, M., Soulileuth, B., Sengtaheuanghoung, O., Dance, D.A.B., Pierret, A., 2016. Land use and soil type determine the presence of the pathogen Burkholderia pseudomallei in tropical rivers. Environmental Science and Pollution Research 23, 7828–7839. doi: 10.1007/s11356-015-5943-z
Notes	Data type: Survey data

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	20211026-M-TROPICS-BD_monitoring_Laos_2016FieldCampaign.tab M-TROPICS-BD_monitoring_Laos/Tabular Data - 6.6 KB Published Nov 9, 2021 36 Downloads 18 Variables, 58 Observations UNF:6:bEdFuW5Ri75YRvd4kiLtFQ== Escherichia coli concentrations and physico-chemical measurements (CSV format) DataTime Series	Access File File Access Public Download Options Comma Separated Values (Original File Format) Tab-Delimited RData Download Metadata Variable Metadata Data File Citation EndNote XML RIS BibTeX
	20211026-M-TROPICS-BD_monitoring_Laos_2016FieldCampaign_data_dictionary.tab M-TROPICS-BD_monitoring_Laos/Tabular Data - 994 B Published Nov 9, 2021 15 Downloads 3 Variables, 18 Observations UNF:6:Jg7OpTferM2SOe9kbQs7/Q== Data dictionary DocumentationDataTime Series	Access File File Access Public Download Options Comma Separated Values (Original File Format) Tab-Delimited RData Download Metadata Variable Metadata Data File Citation EndNote XML RIS BibTeX

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Dataset Persistent ID	doi:10.23708/ZRSBM4
Publication Date	2021-11-09
Title	Escherichia coli concentrations and physico-chemical measurements at the outlet of 29 catchments of the Mekong river basin, Lao PDR, during dry and rainy seasons (2016)
Author	Ribolzi, Olivier (Géosciences Environnement Toulouse (GET) - Université de Toulouse, CNRS, IRD, UPS, CNAP, CNES - France) - ORCID: 0000-0002-9138-6281 Zimmermann, Rosalie (Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital - Lao PDR) - ORCID: 0000-0002-3811-8157 Thammahacksa, Chanthamousone (Department of Agricultural Land Management (DALaM), IRD - Lao PDR) Rattanavong, Sayaphet (Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital - Lao PDR) - ORCID: 0000-0002-5763-9281 Oliva, Priscia (Géosciences Environnement Toulouse (GET) - Université de Toulouse, CNRS, IRD, UPS, CNAP, CNES - France) - ORCID: 0000-0001-8132-4768 Sengtaheuanghoung, Oloth (Department of Agricultural Land Management (DALaM), MAF - Lao PDR) Pierret, Alain (Department of Agricultural Land Management (DALaM), IRD - Lao PDR) - ORCID: 0000-0002-3447-3434
Contact	Use email button above to contact. Ribolzi, Olivier (Géosciences Environnement Toulouse (GET) - Université de Toulouse, CNRS, IRD, UPS, CNAP, CNES - France) Pierret, Alain (Department of Agricultural Land Management (DALaM), IRD - Lao PDR)
Description	This dataset has been collected thanks to the long-term partnership with Department of Agricultural Land Management (DALaM), Lao PDR, which granted the permission for field access, and to the financial, scientific, technical, and/or logistical support of the Multiscale TROPIcal CatchmentS (SNO M-TROPICS; https://mtropics.obs-mip.fr/) critical zone observatory (previously MSEC). This .csv dataset includes Escherichia coli concentrations (MPN 100 mL-1) with upper and lower limits of the confidence interval, and physico-chemical measurements in stream water. Physico-chemical measurements include temperature (°C), electrical conductance (µS cm-1) at 25 °C, dissolved oxygen concentration (mg L-1) and saturation (%), pH (-), oxidation-reduction potential (mV), turbidity (NTU), suspended sediment concentration (g L-1). All variables were measured at the outlet of 29 catchments of the Mekong river basin, in Lao PDR, during both dry and rainy seasons of 2016. The authors acknowledge the financial support of the Institut de Recherche pour le Développement (IRD), including through the regional pilot program Soils, Waters, Coastal Zones and Societies in Southern and Southeast Asia (SELTAR-RPP), the French National Research Agency (TecItEasy project, ANR-13-AGRO-0007), the US Defence Threat Reduction Agency Cooperative Biological Engagement Programme (contract HDTRA-16-C-0017), the Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit funded by the Wellcome Trust of Great Britain (Grant number 089275/H/09/Z), the Lee Ka Shing Foundation of the University of Oxford (grant SM40), and the Nam Theun 2 Power Company (NTPC).
Subject	Agricultural Sciences; Earth and Environmental Sciences; Medicine, Health and Life Sciences
Keyword	Escherichia coli concentration temperature electrical conductance dissolved oxygen concentration dissolved oxygen saturation pH oxidation-reduction potential turbidity suspended sediment concentration M-TROPICS CZO
Scientific Theme	Ecology, aquatic systems (NumeriSud) https://numerisud.ird.fr/documents-et-films/(thematique)/Oc%C3%A9anographie+/+Hydrobiologie_Ecosyst%C3%A8mes+aquatiques Environmental science (NumeriSud) https://numerisud.ird.fr/documents-et-films/(thematique)/G%C3%A9n%C3%A9ralit%C3%A9s+/+Sciences+fondamentales+et+techniques_G%C3%A9ographie%2C+environnement+et+climatologie Hydrology (NumeriSud) https://numerisud.ird.fr/documents-et-films/(thematique)/Sciences+de+la+Terre_Hydrologie Pollution (NumeriSud) https://numerisud.ird.fr/documents-et-films/(thematique)/Oc%C3%A9anographie+/+Hydrobiologie_Pollution+de+l%27eau
Related Publication	Ribolzi, O., Rochelle-Newall, E., Dittrich, S., Auda, Y., Newton, P.N., Rattanavong, S., Knappik, M., Soulileuth, B., Sengtaheuanghoung, O., Dance, D.A.B., Pierret, A., 2016. Land use and soil type determine the presence of the pathogen Burkholderia pseudomallei in tropical rivers. Environmental Science and Pollution Research 23, 7828–7839. doi: 10.1007/s11356-015-5943-z https://doi.org/10.1007/s11356-015-5943-z Zimmermann, R.E., Ribolzi, O., Pierret, A., Rattanavong, S., Robinson, M.T., Newton, P.N., Davong, V., Auda, Y., Zopfi, J., Dance, D.A.B., 2018. Rivers as carriers and potential sentinels for Burkholderia pseudomallei in Laos. Sci. Rep. 8. doi: 10.1038/s41598-018-26684-y https://doi.org/10.1038/s41598-018-26684-y Nakhle, P., Ribolzi, O., Boithias, L., Rattanavong, S., Auda, Y., Sayavong, S., Zimmermann, R., Soulileuth, B., Pando, A., Thammahacksa, C., Rochelle-Newall, E., Santini, W., Martinez, J.M., Gratiot, N., Pierret, A., 2021. Effects of hydrological regime and land use on in-stream Escherichia coli concentration in the Mekong basin, Lao PDR. Sci. Rep. 11, 3460. doi: 10.1038/s41598-021-82891-0 https://doi.org/10.1038/s41598-021-82891-0 Liechti, N., Zimmermann, R.E., Zopfi, J., Robinson, M.T., Pierret, A., Ribolzi, O., Rattanavong, S., Davong, V., Newton, P.N., Wittwer, M., Dance, D.A.B., 2021. Whole-Genome Assemblies of 16 Burkholderia pseudomallei Isolates from Rivers in Laos. Microbiol. Resour. Announc. 10. doi: 10.1128/mra.01226-20 https://doi.org/10.1128/mra.01226-20 Boithias, L., Ribolzi, O., Rochelle-Newall, E., Thammahacksa, C., Nakhle, P., Soulileuth, B., Pando-Bahuon, A., Latsachack, K., Silvera, N., Sounyafong, P., Xayyathip, K., Zimmermann, R., Rattanavong, S., Oliva, P., Pommier, T., Evrard, O., Huon, S., Causse, J., Henry-des-Tureaux, T., Sengtaheuanghoung, O., Sipaseuth, N., Pierret, A., 2022. Escherichia coli concentration, multiscale monitoring over the decade 2011–2021 in the Mekong River basin, Lao PDR. Earth Syst. Sci. Data 14, 2883–2894. doi: 10.5194/essd-14-2883-2022 https://doi.org/10.5194/essd-14-2883-2022
Notes	Data type: Survey data
Language	English
Grant Information	French National Research Agency: TecItEasy ANR-13-AGRO-0007 US Defence Threat Reduction Agency Cooperative Biological Engagement Programme: HDTRA-16-C-0017 Wellcome Trust of Great Britain: 089275/H/09/Z Lee Ka Shing Foundation of the University of Oxford: SM40
Depositor	BOITHIAS, Laurie
Deposit Date	2021-06-12
Time Period Covered	Start: 2016-03-05 ";" End: 2016-03-05
Date of Collection	Start: 2016-07-08 ";" End: 2016-07-08

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Geographic Coverage	Lao People's Democratic Republic

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All users of M-TROPICS data should acknowledge the M-TROPICS CZO and its financing institutions, namely IRD, INSU, and OMP, in any article, communication, poster, report, etc. they may make public, and cite the appropriate DOI of the data they used.
Regarding the specific case of scientific publications using this dataset, it is expressly asked to the authors to cite both the dataset DOI and the related article as listed below:
- Ribolzi O, Zimmermann R, Thammahacksa C, Rattanavong S, Oliva P, Sengtaheuanghoung O, Pierret A, 2021. Escherichia coli concentrations and physico-chemical measurements at the outlet of 29 catchments of the Mekong river basin, Lao PDR, during dry and rainy seasons (2016). DataSuds. https://doi.org/10.23708/ZRSBM4
- Boithias L, Ribolzi O, Rochelle-Newall E, Thammahacksa C, Nakhle P, Soulileuth B, Pando-Bahuon A, Latsachack K, Silvera N, Sounyafong P, Xayyathip K, Zimmermann R, Rattanavong S, Oliva P, Pommier T, Evrard O, Huon S, Causse J, Henry-Des-Tureaux T, Sengtaheuanghoung O, Sipaseuth N, Pierret A, 2022. Escherichia coli concentration, multiscale monitoring over the decade 2011–2021 in the Mekong River basin, Lao PDR. Earth Sys. Sci. Data 14, 2883–2894. https://doi.org/10.5194/essd-14-2883-2022
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- Ribolzi O, Zimmermann R, Thammahacksa C, Rattanavong S, Oliva P, Sengtaheuanghoung O, Pierret A, 2021. Escherichia coli concentrations and physico-chemical measurements at the outlet of 29 catchments of the Mekong river basin, Lao PDR, during dry and rainy seasons (2016). DataSuds. https://doi.org/10.23708/ZRSBM4
- Boithias L, Ribolzi O, Rochelle-Newall E, Thammahacksa C, Nakhle P, Soulileuth B, Pando-Bahuon A, Latsachack K, Silvera N, Sounyafong P, Xayyathip K, Zimmermann R, Rattanavong S, Oliva P, Pommier T, Evrard O, Huon S, Causse J, Henry-Des-Tureaux T, Sengtaheuanghoung O, Sipaseuth N, Pierret A, 2022. Escherichia coli concentration, multiscale monitoring over the decade 2011–2021 in the Mekong River basin, Lao PDR. Earth Sys. Sci. Data 14, 2883–2894. https://doi.org/10.5194/essd-14-2883-2022
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Regarding the specific case of scientific publications using this dataset, it is expressly asked to the authors to cite both the dataset DOI and the related article as listed below:
- Ribolzi O, Zimmermann R, Thammahacksa C, Rattanavong S, Oliva P, Sengtaheuanghoung O, Pierret A, 2021. Escherichia coli concentrations and physico-chemical measurements at the outlet of 29 catchments of the Mekong river basin, Lao PDR, during dry and rainy seasons (2016). DataSuds. https://doi.org/10.23708/ZRSBM4
- Boithias L, Ribolzi O, Rochelle-Newall E, Thammahacksa C, Nakhle P, Soulileuth B, Pando-Bahuon A, Latsachack K, Silvera N, Sounyafong P, Xayyathip K, Zimmermann R, Rattanavong S, Oliva P, Pommier T, Evrard O, Huon S, Causse J, Henry-Des-Tureaux T, Sengtaheuanghoung O, Sipaseuth N, Pierret A, 2022. Escherichia coli concentration, multiscale monitoring over the decade 2011–2021 in the Mekong River basin, Lao PDR. Earth Sys. Sci. Data 14, 2883–2894. https://doi.org/10.5194/essd-14-2883-2022
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