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Publication Year: 2025

241 to 250 of 318 Results

Leaf ion content in pearl millet (Senegal, 2021-2022) Jan 30, 2025 - CERES Team Nakombo-Gbassault, Princia; Arenas, Sebastian; Affortit, Pablo; Faye, Awa; Flis, Paulina; Sine, Bassirou; Moukouanga, Daniel; Kane, Ndjido Ardo; Bennett, Malcolm; Wells, Darren; Cubry, Philippe; Bailey, Liz; Grondin, Alexandre; Vigouroux, Yves; Laplaze, Laurent, 2025, "Leaf ion content in pearl millet (Senegal, 2021-2022)", https://doi.org/10.23708/DWGEAJ, DataSuds, V1, UNF:6:eg+VmV/nauULROuvgkx5Ig== [fileUNF] Pearl millet (Pennisetum glaucum) is a nutrient-rich cereal crop cultivated in arid and semi-arid regions, particularly in sub-Saharan Africa, where it serves as a vital source of grain and fodder for millions of smallholder farmers. This crop is known to produce in hot, dry clim...
Bash_fisher_combining.sh Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022) Shell Script - 2.4 KB - MD5: 4599da09acf163324aee1f4384185c8b Code Bash script used to perform the Fisher combining analysis
Bash_GWAS.sh Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022) Shell Script - 2.2 KB - MD5: bd614d4ea2b3e770b5a2ed19ddb94b0d Code Bash script used to perform the association analysis
Bash_Manhattan_plot.sh Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022) Shell Script - 2.2 KB - MD5: 10f3e7770ff9a61f571d28faecd9a7f6 Code Bash script used to produce Manhattan plots
BLUEs_IonoMil_WW_2021.txt Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022) Plain Text - 27.2 KB - MD5: 631740e3c7d17b6d56d8f82ae430b1ee Data BLUEs for leaf ion content measured under the well-watered treatment in the 2021 field experiment (with day to flowering)
BLUEs_IonoMil_WW_2022.txt Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022) Plain Text - 30.4 KB - MD5: 6d0130ea417438dcff62ea2332243e63 Data BLUEs for leaf ion content measured under well-watered content in the 2022 field experiment (with day to flowering)
emma.txt Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022) Plain Text - 30.1 KB - MD5: 6cf5e392b32eb8207e0a6ccfffc0aa01 Code R script used to perform the EMMA analysis
filtered_PearlMillet.all.snps_maf0.05_miss0.5_imputed_with_metadata.txt Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022) Plain Text - 76.3 MB - MD5: 7c9b1de46a785ae17f8e874ab2ff481c Data Imputed vcf (used for association analysis)
GWAS_ion21_ETM.txt Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022) Plain Text - 72.7 KB - MD5: 8a9db23d2434d4fac37797ef0783b460 Data Input file for GWAS on the dataset obtained in 2021 (contain BLUEs and residues following a Gaussian law)
GWAS_ion22_ETM.txt Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022) Plain Text - 56.9 KB - MD5: ed1f643c63a4b96e9bd3bc873a56a1c2 Data Input file for GWAS on the dataset obtained in 2022 (contain BLUEs and residues following a Gaussian law)

Leaf ion content in pearl millet (Senegal, 2021-2022)

Jan 30, 2025 - CERES Team

Nakombo-Gbassault, Princia; Arenas, Sebastian; Affortit, Pablo; Faye, Awa; Flis, Paulina; Sine, Bassirou; Moukouanga, Daniel; Kane, Ndjido Ardo; Bennett, Malcolm; Wells, Darren; Cubry, Philippe; Bailey, Liz; Grondin, Alexandre; Vigouroux, Yves; Laplaze, Laurent, 2025, "Leaf ion content in pearl millet (Senegal, 2021-2022)", https://doi.org/10.23708/DWGEAJ, DataSuds, V1, UNF:6:eg+VmV/nauULROuvgkx5Ig== [fileUNF]

Pearl millet (Pennisetum glaucum) is a nutrient-rich cereal crop cultivated in arid and semi-arid regions, particularly in sub-Saharan Africa, where it serves as a vital source of grain and fodder for millions of smallholder farmers. This crop is known to produce in hot, dry clim...

Bash_fisher_combining.sh

Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)

Shell Script - 2.4 KB -

Code

Bash script used to perform the Fisher combining analysis

Bash_GWAS.sh

Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)

Shell Script - 2.2 KB -

Code

Bash script used to perform the association analysis

Bash_Manhattan_plot.sh

Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)

Shell Script - 2.2 KB -

Code

Bash script used to produce Manhattan plots

BLUEs_IonoMil_WW_2021.txt

Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)

Plain Text - 27.2 KB -

Data

BLUEs for leaf ion content measured under the well-watered treatment in the 2021 field experiment (with day to flowering)

BLUEs_IonoMil_WW_2022.txt

Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)

Plain Text - 30.4 KB -

Data

BLUEs for leaf ion content measured under well-watered content in the 2022 field experiment (with day to flowering)

emma.txt

Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)

Plain Text - 30.1 KB -

Code

R script used to perform the EMMA analysis

filtered_PearlMillet.all.snps_maf0.05_miss0.5_imputed_with_metadata.txt

Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)

Plain Text - 76.3 MB -

Data

Imputed vcf (used for association analysis)

GWAS_ion21_ETM.txt

Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)

Plain Text - 72.7 KB -

Data

Input file for GWAS on the dataset obtained in 2021 (contain BLUEs and residues following a Gaussian law)

GWAS_ion22_ETM.txt

Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)

Plain Text - 56.9 KB -

Data

Input file for GWAS on the dataset obtained in 2022 (contain BLUEs and residues following a Gaussian law)

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