DataSuds

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Publication Year: 2024

791 to 800 of 920 Results

outputs.tar.gz Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms Gzip Archive - 22.2 KB - MD5: 156c6e3b9a823a4050537032aa3973da Output of the mbctools pipeline. Log files and parameters used.
refs.tar.gz Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms Gzip Archive - 6.1 KB - MD5: 519868512efc372dfdb5b26c82f9a49e Reference sequences used to classify the given sequences into their respective markers.
results_by_locus.tar.gz Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms Gzip Archive - 57.4 KB - MD5: bc0523cb28578e7a67b72d961b2092e7 Pipeline output, results by locus
RJSU6DXE013-Alignment.txt.gz Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms Gzip Archive - 88.8 KB - MD5: b33119454d0bc0a87b0ad6b1de5e40fe Blast result, input for metaXplor
samples.txt.gz Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms Gzip Archive - 104 B - MD5: 695aa82b79975f82ded83af665659247 List file with the name of the analysed samples.
scripts.tar.gz Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms Gzip Archive - 11.7 KB - MD5: f4b7789ad6ae48e3ce19b336974b9d50 Used command line to process the test data (pipeline output).
tmp_files.tar.gz Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms Gzip Archive - 258.7 MB - MD5: ca56ac6f52c700a8ac80dbf345b1565c Temporary files, pipeline output.
Dataset describing the impact of earthworms on Si dynamics in paddy fields in Northern Vietnam in 2023 Jan 10, 2024 - UMR iEES-Paris Jouquet, P.; Pham Van, Q.; Bottinelli, N.; Minh Ngoc, N.; Dang Tran, Q.; Meunier, J.D., 2024, "Dataset describing the impact of earthworms on Si dynamics in paddy fields in Northern Vietnam in 2023", https://doi.org/10.23708/2ICFHU, DataSuds, V1, UNF:6:x0hWZzhX0xyomuxNBe4gFA== [fileUNF] Silicon (Si) is an essential element for the growth and development of rice plants, playing a crucial role in their overall health and productivity. This dataset describes the properties of earthworm casts and their surrounding reference soil in 23 different sites. Soil propertie...
data_dataverse.tab Jan 10, 2024 - Dataset describing the impact of earthworms on Si dynamics in paddy fields in Northern Vietnam in 2023 Tabular Data - 17.4 KB - 42 Variables, 46 Observations - UNF:6:x0hWZzhX0xyomuxNBe4gFA==
Marine mammal stranding data of New Caledonia: Province Sud (1940-2022) Jan 8, 2024 - Marine mammal stranding data of New Caledonia (1980-2022) Garrigue, Claire, 2024, "Marine mammal stranding data of New Caledonia: Province Sud (1940-2022)", https://doi.org/10.23708/GPYMHX, DataSuds, V1 This dataverse contains all the information relating to each stranding of marine mammals listed in the Southern Province of New Caledonia since the 1980s: - stranding files - autopsy report - notes / comments - photos - newspaper articles Since 1991,we attempted to collect inform...

outputs.tar.gz

Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms

Gzip Archive - 22.2 KB -

Output of the mbctools pipeline. Log files and parameters used.

refs.tar.gz

Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms

Gzip Archive - 6.1 KB -

Reference sequences used to classify the given sequences into their respective markers.

results_by_locus.tar.gz

Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms

Gzip Archive - 57.4 KB -

Pipeline output, results by locus

RJSU6DXE013-Alignment.txt.gz

Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms

Gzip Archive - 88.8 KB -

Blast result, input for metaXplor

samples.txt.gz

Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms

Gzip Archive - 104 B -

List file with the name of the analysed samples.

scripts.tar.gz

Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms

Gzip Archive - 11.7 KB -

Used command line to process the test data (pipeline output).

tmp_files.tar.gz

Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms

Gzip Archive - 258.7 MB -

Temporary files, pipeline output.

Dataset describing the impact of earthworms on Si dynamics in paddy fields in Northern Vietnam in 2023

Jan 10, 2024 - UMR iEES-Paris

Jouquet, P.; Pham Van, Q.; Bottinelli, N.; Minh Ngoc, N.; Dang Tran, Q.; Meunier, J.D., 2024, "Dataset describing the impact of earthworms on Si dynamics in paddy fields in Northern Vietnam in 2023", https://doi.org/10.23708/2ICFHU, DataSuds, V1, UNF:6:x0hWZzhX0xyomuxNBe4gFA== [fileUNF]

Silicon (Si) is an essential element for the growth and development of rice plants, playing a crucial role in their overall health and productivity. This dataset describes the properties of earthworm casts and their surrounding reference soil in 23 different sites. Soil propertie...

data_dataverse.tab

Jan 10, 2024 - Dataset describing the impact of earthworms on Si dynamics in paddy fields in Northern Vietnam in 2023

Tabular Data - 17.4 KB - 42 Variables, 46 Observations -

Marine mammal stranding data of New Caledonia: Province Sud (1940-2022)

Jan 8, 2024 - Marine mammal stranding data of New Caledonia (1980-2022)

Garrigue, Claire, 2024, "Marine mammal stranding data of New Caledonia: Province Sud (1940-2022)", https://doi.org/10.23708/GPYMHX, DataSuds, V1

This dataverse contains all the information relating to each stranding of marine mammals listed in the Southern Province of New Caledonia since the 1980s: - stranding files - autopsy report - notes / comments - photos - newspaper articles Since 1991,we attempted to collect inform...

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