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191 to 200 of 421 Results
BLUEs_IonoMil_WW_2022.txt
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
Plain Text - 30.4 KB - MD5: 6d0130ea417438dcff62ea2332243e63
Data
BLUEs for leaf ion content measured under well-watered content in the 2022 field experiment (with day to flowering)
emma.txt
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
Plain Text - 30.1 KB - MD5: 6cf5e392b32eb8207e0a6ccfffc0aa01
Code
R script used to perform the EMMA analysis
filtered_PearlMillet.all.snps_maf0.05_miss0.5_imputed_with_metadata.txt
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
Plain Text - 76.3 MB - MD5: 7c9b1de46a785ae17f8e874ab2ff481c
Data
Imputed vcf (used for association analysis)
GWAS_ion21_ETM.txt
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
Plain Text - 72.7 KB - MD5: 8a9db23d2434d4fac37797ef0783b460
Data
Input file for GWAS on the dataset obtained in 2021 (contain BLUEs and residues following a Gaussian law)
GWAS_ion22_ETM.txt
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
Plain Text - 56.9 KB - MD5: ed1f643c63a4b96e9bd3bc873a56a1c2
Data
Input file for GWAS on the dataset obtained in 2022 (contain BLUEs and residues following a Gaussian law)
In_PRUNE.prune.in
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
Plain Text - 1.9 MB - MD5: 7c56cb8d09822cb707f57237ff14dac3
Data
List of SNPs that are independent
PearlMillet.all.snps_maf0.05_miss0.5.vcf
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
text/vcard - 637.7 MB - MD5: 2e19a54384d3913873558ad6f833d9ff
Data
Filtered SNPs from GBS genotyping (file used for pruning)
Pearl_millet_IonoMil_ReadMe.txt
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
Plain Text - 5.5 KB - MD5: e056720a5486b5f6dc4d394025c36b98
Documentation
Dataset citation, description and terms of use
Pruning_script.txt
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
Plain Text - 792 B - MD5: 58731d81bc0bf19bf2291cdaef04f070
Code
R script used to remove non-independent SNPs from the vcf
Residus_IonoMil_WW_2021.txt
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
Plain Text - 31.7 KB - MD5: 2fe1a762a84469f22831013acb1fc369
Data
Residuals of the linear regression between individual ion concentrations (BLUEs) and flowering time measured under the well-watered treatment in 2021
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