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1 to 10 of 7,787 Results

Data_Use_Agreement_10_23708_IWFBR4.docx Aug 7, 2026 - Barriers and solutions to adopting healthy diets amongst women and children in Addis Ababa, Ethiopia: a Photovoice study MS Word - 13.3 KB - MD5: 811d12291e970dd83e42dde7b22b7a00 Documentation Form for requesting access to restricted data. This form must be downloaded, completed, signed and sent to the contact point for this dataset and to data@ird.fr for any request for access to restricted data as described in the terms of use.
malaria_HaemoproteusWW2_githubarchive.tar.gz Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species Gzip Archive - 1.3 MB - MD5: 05f79c3754ecdb187aa28d5caf9cc54f CodeDocumentation Compressed archive of the GitHub which provides all the bioinformatic details of the scripts used to generate the genome and its annotation. The original is available here: https://github.com/mikafontaine/malaria_HaemoproteusWW2.
ReadMe_DOI_10_23708_0QPMON.txt Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species Plain Text - 2.6 KB - MD5: 8dc0b5a6fe090c38c1feb4183cd0149d Documentation contains the citation, description and conditions of use, or even access, depending on the case, to the dataset
WW2.ILRA.fasta.gz Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species Gzip Archive - 6.3 MB - MD5: 538f59792015594f54fffeabac1bafd7 Données Original genome assembly for Haemoproteus majoris (lineage WW2). The genome was assembled using Nanopore long-read sequencing and polished with Illumina short-reads, yielding 145 contigs with a total assembly size of 23.9Mb and a G+C content of 27.85%. More details are provided i...
WW2_hardmaskup.gff3.gz Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species Gzip Archive - 749.1 KB - MD5: 3f41fe888c5a06d338be77d8245db71e Données Genome annotations associated with the WW2 reference assembly. The genome annotation was generated using the tool Companion (v2.2.11, Release 63) (Haese-Hill W, Crouch K, Otto TD. 2024, https://doi.org/10.1093/nar/gkae378). More details are provided in the manuscript and the asso...
ReadMe.txt Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Plain Text - 3.0 KB - MD5: f7a1adcb8164f01c0df6bdd70a6915e5 Documentation contains information for understanding the dataset, including a list of each file deposited and its role, in relation to the structure of the files within this repository.
Viralmetagenome.sh Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Shell Script - 308 B - MD5: 4df3fc615e6542de1cab355a3c856fd2 Code Viralmetagenome command script.
Viralmetagenome_input.tab Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Tabular Data - 658 B - 3 Variables, 5 Observations - UNF:6:jTmqDDNM4j3t0aAGiilaCA== Données Viralmetagenome samples input file, companion file of Viralmetagenome.sh.
compile2.py Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Python Source Code - 3.7 KB - MD5: d35404f2eff0237f1839c10fdfeac401 Code Script for summarising for each taxonomic assignment
Viroseek_downstream_analysis2.0.Rmd Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing R Notebook - 84.3 KB - MD5: 4223f5eada029a205c9b71ebccf8d192 Code Rmarkdown for downstream analysis

Data_Use_Agreement_10_23708_IWFBR4.docx

Aug 7, 2026 - Barriers and solutions to adopting healthy diets amongst women and children in Addis Ababa, Ethiopia: a Photovoice study

MS Word - 13.3 KB -

Documentation

Form for requesting access to restricted data. This form must be downloaded, completed, signed and sent to the contact point for this dataset and to data@ird.fr for any request for access to restricted data as described in the terms of use.

malaria_HaemoproteusWW2_githubarchive.tar.gz

Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species

Gzip Archive - 1.3 MB -

CodeDocumentation

Compressed archive of the GitHub which provides all the bioinformatic details of the scripts used to generate the genome and its annotation. The original is available here: https://github.com/mikafontaine/malaria_HaemoproteusWW2.

ReadMe_DOI_10_23708_0QPMON.txt

Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species

Plain Text - 2.6 KB -

Documentation

contains the citation, description and conditions of use, or even access, depending on the case, to the dataset

WW2.ILRA.fasta.gz

Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species

Gzip Archive - 6.3 MB -

Données

Original genome assembly for Haemoproteus majoris (lineage WW2). The genome was assembled using Nanopore long-read sequencing and polished with Illumina short-reads, yielding 145 contigs with a total assembly size of 23.9Mb and a G+C content of 27.85%. More details are provided i...

WW2_hardmaskup.gff3.gz

Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species

Gzip Archive - 749.1 KB -

Données

Genome annotations associated with the WW2 reference assembly. The genome annotation was generated using the tool Companion (v2.2.11, Release 63) (Haese-Hill W, Crouch K, Otto TD. 2024, https://doi.org/10.1093/nar/gkae378). More details are provided in the manuscript and the asso...

ReadMe.txt

Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Plain Text - 3.0 KB -

Documentation

contains information for understanding the dataset, including a list of each file deposited and its role, in relation to the structure of the files within this repository.

Viralmetagenome.sh

Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Shell Script - 308 B -

Code

Viralmetagenome command script.

Viralmetagenome_input.tab

Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Tabular Data - 658 B - 3 Variables, 5 Observations -

Données

Viralmetagenome samples input file, companion file of Viralmetagenome.sh.

compile2.py

Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Python Source Code - 3.7 KB -

Code

Script for summarising for each taxonomic assignment

Viroseek_downstream_analysis2.0.Rmd

Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

R Notebook - 84.3 KB -

Code

Rmarkdown for downstream analysis

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