1,591 to 1,600 of 8,486 Results
May 16, 2024 -
High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)
Adobe PDF - 8.0 MB -
MD5: b221ac40593882f7deb0a1a3d35b3a17
Introduction to Population Genetics for analysing the genetic diversity of crops |
May 16, 2024 -
High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)
HTML - 4.3 MB -
MD5: 828d31d700d62f10b8f9fbf120f7883a
In this R tutorial, we we will take a processed VCF. First, we will explore diversity through: polymorphic SNPs (required packages: adegenet), allele frequencies (required packages: adegenet), private and shared alleles (required packages: poppr), allelic richness (required packa... |
May 16, 2024 -
High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)
R Syntax - 975 B -
MD5: c7a6dda8fc71fd10aebe8212eb9edbdf
List of packages to install for session 3 on diversity and structure analysis. To be opened with RStudio. |
May 16, 2024 -
High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)
Adobe PDF - 3.8 MB -
MD5: f5d2b43e2d5a5eefd051c29b2c68833e
Introduction to Population Genetics for analysing the genetic structure of crops. |
May 16, 2024 -
High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)
Adobe PDF - 912.5 KB -
MD5: da9c01bfb9ae62fefc2a5b288cc9889d
Introduction to the core concept of genome wide association studies. |
May 16, 2024 -
High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)
Adobe PDF - 73.2 KB -
MD5: 17bd3bb83031e7349c5d4730581569e8
This file comments on the R script for GWAS analysis. |
May 16, 2024 -
High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)
Adobe PDF - 574.9 KB -
MD5: b3bd4b806a6968e50f665cd4e34e832b
This file presents a script for GWAS analysis using R. We used a dataset of pearl millet accessions (Varshney et al. 2017). |
May 16, 2024 -
High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)
Tabular Data - 2.5 KB - 5 Variables, 55 Observations - UNF:6:LNg1C4IBq05VUN9bbZDOeQ==
Table containing the passport data of the pearl millet accessions. This data file is associated with the script "S1_Introduction_to_R_Passport.html".
These data are published in Berthouly-Salazar et al. (2016). |
Lejon, Veerle; Bieler, Sylvain; Camara, Oumou; N'djetchi, Kassi Martial; Jamonneau, Vincent; Bart, Jean-Mathieu; Bucheton, Bruno; Solano, Philippe; Rotureau, Brice; Kaba, Dramane; N'dri, Louis; Koffi, Mathurin; Bessell, Paul; Tall, Alkali; Glover, Lucy; Kaboré, Jacques; Traoré, Mélika Barkissa; Koné, Minayegninrin; Coulibaly, Bamoro; Adingra, Guy Pacome; Soumah, Aissata; Gassama, Mohamed; Camara, Abdoulaye Dansy; Compaoré, Charlie Franck Alfred; Camara, Aïssata; Boiro, Salimatou; Anton, Elena Perez; Van Reet, Nick, 2022, "Prospective evaluation of the specificity of serological tests for Human African Trypanosomiasis: documentation and data", https://doi.org/10.23708/APDHAG, DataSuds, V2, UNF:6:YotwBzPtoexYPPvj80gWtA== [fileUNF]
In the last decade, the prevalence of Trypanosoma brucei gambiense (Tbg) human African trypanosomiasis (HAT) has fallen and HAT has been targeted for transmission interruption by 2030. To achieve this goal, disease surveillance remains essential and is based on the identification... |
May 13, 2024 -
Prospective evaluation of the specificity of serological tests for Human African Trypanosomiasis: documentation and data
Plain Text - 3.9 KB -
MD5: 0a83b63402bf225c427b12298bee2a61
Dataset citation, description and terms of use. |
