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Publication Year: 2024

641 to 650 of 926 Results

0_ReadMe.txt May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa) Plain Text - 2.1 KB - MD5: 0ad59fd46069aaec2008347fc45ec2ce Documentation Dataset citation, description and terms of use.
chr5_5association.txt May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa) Plain Text - 382.2 MB - MD5: 5888c01657ff5624ad88b8200d103076 Data This file contains the data for the GWAS analysis to be used with 'S4_script_GWAS_basic_Rcode.pdf' (Varshney et al. 2017).
GBS-chr2_raw.vcf.gz May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa) Gzip Archive - 53.7 MB - MD5: 7ac07ce9f286e974d6c5c572c40f78d8 Data VCF file containing the raw genomic data of pearl millet. This data file is associated with the script "S2_filter_VCF.html".These data are published in Berthouly-Salazar et al. (2016).
Introduction.pdf May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa) Adobe PDF - 1.8 MB - MD5: fdde654296e7c56ad70fd3ee0a2ea070 Documentation This file presents the course, its objectives and the context in which it was implemented.
millet_filtered.vcf May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa) text/vcard - 34.5 MB - MD5: 6eab73245746d73169f90b8141511fa0 Data VCF file containing the genomic data of the pearl millet. This data file is associated with the script "S3_Genetic_diversity+structure.html".These data are published in Berthouly-Salazar et al. (2016).
millet_metadata.tab May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa) Tabular Data - 2.5 KB - 5 Variables, 55 Observations - UNF:6:LNg1C4IBq05VUN9bbZDOeQ== Data Table containing the passport data of the pearl millet accessions in the VCF file. This data file is associated with the script "S3_Genetic_diversity+structure.html". These data are published in Berthouly-Salazar et al. (2016).
S1_Download_R.pdf May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa) Adobe PDF - 288.7 KB - MD5: dbbdb9df803c84725df9ff5b4abc42f7 Documentation This file is a tutorial for installing R and RStudio.
S1_example.fastq May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa) Unknown - 3.6 KB - MD5: 3bc9d9f537ea4d956c4dc7f7970e7956 Data
S1_example.txt May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa) Plain Text - 3.6 KB - MD5: 3bc9d9f537ea4d956c4dc7f7970e7956 Documentation
S1-IntroductionToGBS.pdf May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa) Adobe PDF - 3.3 MB - MD5: 09f0c52d9219dd372cf0f3c3eff8b2f5 Documentation

0_ReadMe.txt

May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)

Plain Text - 2.1 KB -

Documentation

Dataset citation, description and terms of use.

chr5_5association.txt

May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)

Plain Text - 382.2 MB -

Data

This file contains the data for the GWAS analysis to be used with 'S4_script_GWAS_basic_Rcode.pdf' (Varshney et al. 2017).

GBS-chr2_raw.vcf.gz

May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)

Gzip Archive - 53.7 MB -

Data

VCF file containing the raw genomic data of pearl millet. This data file is associated with the script "S2_filter_VCF.html".These data are published in Berthouly-Salazar et al. (2016).

Introduction.pdf

May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)

Adobe PDF - 1.8 MB -

Documentation

This file presents the course, its objectives and the context in which it was implemented.

millet_filtered.vcf

May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)

text/vcard - 34.5 MB -

Data

VCF file containing the genomic data of the pearl millet. This data file is associated with the script "S3_Genetic_diversity+structure.html".These data are published in Berthouly-Salazar et al. (2016).

millet_metadata.tab

May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)

Tabular Data - 2.5 KB - 5 Variables, 55 Observations -

Data

Table containing the passport data of the pearl millet accessions in the VCF file. This data file is associated with the script "S3_Genetic_diversity+structure.html". These data are published in Berthouly-Salazar et al. (2016).

S1_Download_R.pdf

May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)

Adobe PDF - 288.7 KB -

Documentation

This file is a tutorial for installing R and RStudio.

S1_example.fastq

May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)

Unknown - 3.6 KB -

Data

S1_example.txt

May 16, 2024 - High throughput genetic diversity analyses of neglected crops: training data, codes and materials (Africa)

Plain Text - 3.6 KB -