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publicationDate: 2026

281 to 290 of 848 Results

malaria_HaemoproteusWW2_githubarchive.tar.gz Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species Gzip Archive - 1.3 MB - MD5: 05f79c3754ecdb187aa28d5caf9cc54f CodeDocumentation Compressed archive of the GitHub which provides all the bioinformatic details of the scripts used to generate the genome and its annotation. The original is available here: https://github.com/mikafontaine/malaria_HaemoproteusWW2.
ReadMe_DOI_10_23708_0QPMON.txt Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species Plain Text - 2.6 KB - MD5: 8dc0b5a6fe090c38c1feb4183cd0149d Documentation contains the citation, description and conditions of use, or even access, depending on the case, to the dataset
WW2.ILRA.fasta.gz Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species Gzip Archive - 6.3 MB - MD5: 538f59792015594f54fffeabac1bafd7 Données Original genome assembly for Haemoproteus majoris (lineage WW2). The genome was assembled using Nanopore long-read sequencing and polished with Illumina short-reads, yielding 145 contigs with a total assembly size of 23.9Mb and a G+C content of 27.85%. More details are provided i...
WW2_hardmaskup.gff3.gz Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species Gzip Archive - 749.1 KB - MD5: 3f41fe888c5a06d338be77d8245db71e Données Genome annotations associated with the WW2 reference assembly. The genome annotation was generated using the tool Companion (v2.2.11, Release 63) (Haese-Hill W, Crouch K, Otto TD. 2024, https://doi.org/10.1093/nar/gkae378). More details are provided in the manuscript and the asso...
GraNPA Simulated data(IRD - Institut de Recherche pour le Développement) Jul 31, 2026GranPA
cattle data Jul 31, 2026 - GraNPA true data Carrette, Camille, 2026, "cattle data", https://doi.org/10.23708/2G2DFB, DataSuds, V1 Cattle Pangenome variation graph data used in the GranPA paper
bovin_granpa.zip Jul 31, 2026 - cattle data ZIP Archive - 205.7 MB - MD5: 8ba76f910f9e0ddf405f0f9154251122
CattlePVG.txt Jul 31, 2026 - cattle data Plain Text - 73 B - MD5: 13843a4dbc06a6f0c423c40229955bee
GraNPA true data(IRD - Institut de Recherche pour le Développement) Jul 31, 2026GranPA
Supplementary command lines for the GraNPA paper Jul 30, 2026 - GraNPA other codes used for the manuscript Carrette, Camille; Muller, Cédric, 2026, "Supplementary command lines for the GraNPA paper", https://doi.org/10.23708/AU5ALD, DataSuds, V1 This file contains all the commands used for generate data and results in the GranPA paper

malaria_HaemoproteusWW2_githubarchive.tar.gz

Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species

Gzip Archive - 1.3 MB -

CodeDocumentation

Compressed archive of the GitHub which provides all the bioinformatic details of the scripts used to generate the genome and its annotation. The original is available here: https://github.com/mikafontaine/malaria_HaemoproteusWW2.

ReadMe_DOI_10_23708_0QPMON.txt

Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species

Plain Text - 2.6 KB -

Documentation

contains the citation, description and conditions of use, or even access, depending on the case, to the dataset

WW2.ILRA.fasta.gz

Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species

Gzip Archive - 6.3 MB -

Données

Original genome assembly for Haemoproteus majoris (lineage WW2). The genome was assembled using Nanopore long-read sequencing and polished with Illumina short-reads, yielding 145 contigs with a total assembly size of 23.9Mb and a G+C content of 27.85%. More details are provided i...

WW2_hardmaskup.gff3.gz

Aug 5, 2026 - Replication Data for: The genome of the avian malaria parasite Haemoproteus majoris (lineage WW2) and its relationship to other Plasmodium species

Gzip Archive - 749.1 KB -

Données

Genome annotations associated with the WW2 reference assembly. The genome annotation was generated using the tool Companion (v2.2.11, Release 63) (Haese-Hill W, Crouch K, Otto TD. 2024, https://doi.org/10.1093/nar/gkae378). More details are provided in the manuscript and the asso...

GraNPA Simulated data(IRD - Institut de Recherche pour le Développement)

Jul 31, 2026GranPA

cattle data

Jul 31, 2026 - GraNPA true data

Carrette, Camille, 2026, "cattle data", https://doi.org/10.23708/2G2DFB, DataSuds, V1

Cattle Pangenome variation graph data used in the GranPA paper

bovin_granpa.zip

Jul 31, 2026 - cattle data

ZIP Archive - 205.7 MB -

CattlePVG.txt

Jul 31, 2026 - cattle data

Plain Text - 73 B -

GraNPA true data(IRD - Institut de Recherche pour le Développement)

Jul 31, 2026GranPA

Supplementary command lines for the GraNPA paper

Jul 30, 2026 - GraNPA other codes used for the manuscript

Carrette, Camille; Muller, Cédric, 2026, "Supplementary command lines for the GraNPA paper", https://doi.org/10.23708/AU5ALD, DataSuds, V1

This file contains all the commands used for generate data and results in the GranPA paper

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