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321 to 330 of 457 Results
asv1.fasta
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Unknown - 1.8 KB - MD5: b52e6799cb42ab36b725fcc187a8b056
Données
Fasta file required for ViroSeek_downstream_analysis.rmd
bash.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 2.4 KB - MD5: 000890f8685ca18eac744416df40240e
Code
Modules for ViroSeek
bbmap.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 693 B - MD5: e8fa0db631cf655672f252ca01ef8789
Code
Modules for ViroSeek
bioawk.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 655 B - MD5: 76915c2d9c8fc0265abb386b301e7c73
Code
Modules for ViroSeek
CAMISIM_script.sh
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Shell Script - 4.3 KB - MD5: 7d1270ccb9f41129020b74093984e1ba
Code
Script to generate simulated paired-end metagenomic samples
compile2.py
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Python Source Code - 3.7 KB - MD5: 5b7a5150bc4f3414b6258c75ab30f952
Code
Script for summarising for each taxonomic assignment
diamond.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 609 B - MD5: 2f3f68a8fbdf184b809440c61df968ef
Code
Modules for ViroSeek
fastp.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 1.0 KB - MD5: 954846bb0b0e5e86f08b763401828ef2
Code
Modules for ViroSeek
fastqc.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 504 B - MD5: ea6a2ab0faa9f087aaf971d78d34c5d7
Code
Modules for ViroSeek
HelicobacterHepaticus.fasta
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Unknown - 1.7 MB - MD5: 14390a0d82d57ab655b008847fa20887
Données
Companion file for CAMISIM_script.sh
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