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publicationDate: 2026

431 to 440 of 529 Results

taxprofiler_db.tab Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Tabular Data - 186 B - 4 Variables, 1 Observations - UNF:6:owXJ1TE2Pl/ttHdbzldF6g== Données taxprofiler database input file, companion file of Taxprofiler.sh.
taxprofiler_input.tab Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Tabular Data - 828 B - 6 Variables, 5 Observations - UNF:6:K/XMHKnbfbWmNFfjnqG7CA== Données taxprofiler samples input file, companion file of Taxprofiler.sh.
taxprof_ressouces.config Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Unknown - 103 B - MD5: 653be8d086a3fe012cc314f1778222d6 Code Configuration file for Taxprofiler execution, companion file of Taxprofiler.sh.
Viroseek.sh Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Shell Script - 537 B - MD5: 5f26695e80c215ec06a2d729eb968035 Code ViroSeek command script, used in this study.
ViroSeek_input.tab Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Tabular Data - 733 B - 3 Variables, 5 Observations - UNF:6:tyuLW2kmYZtk+8pIMV/RPQ== Données ViroSeek samples input file, companion file of Viroseek.sh.
Virustaxo.sh Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Shell Script - 796 B - MD5: 0795e28824f2eea8ac17a2831eff3fa2 Code Virustaxo command script.
asv1.fasta Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Unknown - 1.8 KB - MD5: b52e6799cb42ab36b725fcc187a8b056 Données Fasta file required for ViroSeek_downstream_analysis.rmd
metadataencours.tab Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Tabular Data - 330 B - 6 Variables, 6 Observations - UNF:6:G/lBLbWcA/mrI8LJUMN5ww== Données Excel for ViroSeek_downstream_analysis.rmd
bioawk.nf Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Nextflow Script - 655 B - MD5: 76915c2d9c8fc0265abb386b301e7c73 Code Modules for ViroSeek
fastp.nf Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing Nextflow Script - 1.0 KB - MD5: 954846bb0b0e5e86f08b763401828ef2 Code Modules for ViroSeek

taxprofiler_db.tab

Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Tabular Data - 186 B - 4 Variables, 1 Observations -

Données

taxprofiler database input file, companion file of Taxprofiler.sh.

taxprofiler_input.tab

Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Tabular Data - 828 B - 6 Variables, 5 Observations -

Données

taxprofiler samples input file, companion file of Taxprofiler.sh.

taxprof_ressouces.config

Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Unknown - 103 B -

Code

Configuration file for Taxprofiler execution, companion file of Taxprofiler.sh.

Viroseek.sh

Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Shell Script - 537 B -

Code

ViroSeek command script, used in this study.

ViroSeek_input.tab

Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Tabular Data - 733 B - 3 Variables, 5 Observations -

Données

ViroSeek samples input file, companion file of Viroseek.sh.

Virustaxo.sh

Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Shell Script - 796 B -

Code

Virustaxo command script.

asv1.fasta

Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Unknown - 1.8 KB -

Données

Fasta file required for ViroSeek_downstream_analysis.rmd

metadataencours.tab

Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Tabular Data - 330 B - 6 Variables, 6 Observations -

Données

Excel for ViroSeek_downstream_analysis.rmd

bioawk.nf

Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Nextflow Script - 655 B -

Code

Modules for ViroSeek

fastp.nf

Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing

Nextflow Script - 1.0 KB -

Code

Modules for ViroSeek

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