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1,441 to 1,450 of 7,712 Results

Romero_et_al_GBE2024_AMOVA.tar.gz Aug 5, 2024 - Replication data and scripts for - Mitochondrial variation in Anopheles gambiae and Anopheles coluzzii: phylogeographic legacy and mito-nuclear associations with metabolic resistance to pathogens and insecticides Gzip Archive - 912.2 KB - MD5: 2cc81cffaff0960a37cd965b2f5bfc5d CodeDataDocumentation Input files, R-scripts, and raw results required to reproduce the Analysis of Molecular Variance (AMOVA) on the Ag1000G data. The tar archive includes: (1) the multi-fasta DNA sequence input files (.fasta) with the sequence name including the sample-ID + pop_id + [ groups ID ] ;...
Romero_et_al_GBE2024_final_alignment_new_header_no_loop_no_insertions_only_coding_1222seq.fasta Aug 5, 2024 - Replication data and scripts for - Mitochondrial variation in Anopheles gambiae and Anopheles coluzzii: phylogeographic legacy and mito-nuclear associations with metabolic resistance to pathogens and insecticides Unknown - 17.3 MB - MD5: 4874423647b8174bbbf249bf04a5968b Data Mitogenome DNA sequence alignments (in multi-fasta format) generated in the present study for all the samples considered (n=1222). These include the 1142 samples from the Anopheles gambiae 1000 genome project (2020), those of the Anopheles gambiae complex from Fontaine et al. 201...
Romero_et_al_GBE2024_final_alignment_new_header_no_loop_no_insertions_only_coding_withoutoutgroup_sorted_1142seq_Ag1000G.fasta Aug 5, 2024 - Replication data and scripts for - Mitochondrial variation in Anopheles gambiae and Anopheles coluzzii: phylogeographic legacy and mito-nuclear associations with metabolic resistance to pathogens and insecticides Unknown - 16.2 MB - MD5: 4ece8cead64adf08c08b3ca4f75964af Data Mitogenome DNA sequence alignments (in multi-fasta format) generated in the present study for the 1142 samples from the Anopheles gambiae 1000 genome project (2020). Sample ID are as detailed in Table S2 of the paper. Note that the control region is excluded from the alignment (s...
Romero_et_al_GBE2024_Romero_pipeline_AGC_Fontaine_etal_2015_final_alignment_new_header_no_loop_no_insertions_only_coding_80seq.fasta Aug 5, 2024 - Replication data and scripts for - Mitochondrial variation in Anopheles gambiae and Anopheles coluzzii: phylogeographic legacy and mito-nuclear associations with metabolic resistance to pathogens and insecticides Unknown - 1.1 MB - MD5: 44d5c75f8c8fdad58a6f4be465c1c576 Data Mitogenome DNA sequence alignments (in multi-fasta format) generated in the present study for the samples of the Anopheles gambiae complex from Fontaine et al. 2015, and the two outgroup species (Anopheles chrsityi and Anopheles epiroticus). Sample ID are as detailed in Table S1...
0_ReadMe.txt Aug 5, 2024 - Supplementary data for: Transpiration efficiency variations in the pearl millet reference collection PMiGAP Plain Text - 2.1 KB - MD5: 859eaa1d64c7909122250061b3660f8e Documentation Data citation, description and terms of use
RawData_PearlMillet_2012.tab Aug 5, 2024 - Supplementary data for: Transpiration efficiency variations in the pearl millet reference collection PMiGAP Tabular Data - 416.7 KB - 47 Variables, 1300 Observations - UNF:6:NDcIEOWxSAayBuy0QnOVpA== Data Raw data file for 2012 (tsv data file)
RawData_PearlMillet_2013.tab Aug 5, 2024 - Supplementary data for: Transpiration efficiency variations in the pearl millet reference collection PMiGAP Tabular Data - 154.9 KB - 42 Variables, 504 Observations - UNF:6:+m3VscAA/1AWpc1T5A4Kwg== Data Raw data file for 2013 (tsv data file)
RawData_PearlMillet_2015.tab Aug 5, 2024 - Supplementary data for: Transpiration efficiency variations in the pearl millet reference collection PMiGAP Tabular Data - 243.2 KB - 26 Variables, 1400 Observations - UNF:6:yMcUich+zRPkR7659O4ptQ== Data Raw data file for 2015 (tsv data file)
RawData_PearlMillet_data_dictionary.xlsx Aug 5, 2024 - Supplementary data for: Transpiration efficiency variations in the pearl millet reference collection PMiGAP MS Excel Spreadsheet - 9.5 KB - MD5: 975eb6351ebb422e0b87bf8dde611f1d Documentation Data dictionary
RAWDATA_PEARLMILLET_TE_ASSESSMENT.tab Aug 5, 2024 - Supplementary data for: Transpiration efficiency variations in the pearl millet reference collection PMiGAP Tabular Data - 3.5 KB - 16 Variables, 52 Observations - UNF:6:x/PBed13+tzuQ5B3Oe47FA== DataDocumentation Raw data file for the three years 2012, 2013 and 2015 with a description of each variable in an excel format (original xls file)

Romero_et_al_GBE2024_AMOVA.tar.gz

Aug 5, 2024 - Replication data and scripts for - Mitochondrial variation in Anopheles gambiae and Anopheles coluzzii: phylogeographic legacy and mito-nuclear associations with metabolic resistance to pathogens and insecticides

Gzip Archive - 912.2 KB -

CodeDataDocumentation

Input files, R-scripts, and raw results required to reproduce the Analysis of Molecular Variance (AMOVA) on the Ag1000G data. The tar archive includes: (1) the multi-fasta DNA sequence input files (.fasta) with the sequence name including the sample-ID + pop_id + [ groups ID ] ;...

Romero_et_al_GBE2024_final_alignment_new_header_no_loop_no_insertions_only_coding_1222seq.fasta

Unknown - 17.3 MB -

Data

Mitogenome DNA sequence alignments (in multi-fasta format) generated in the present study for all the samples considered (n=1222). These include the 1142 samples from the Anopheles gambiae 1000 genome project (2020), those of the Anopheles gambiae complex from Fontaine et al. 201...

Romero_et_al_GBE2024_final_alignment_new_header_no_loop_no_insertions_only_coding_withoutoutgroup_sorted_1142seq_Ag1000G.fasta

Unknown - 16.2 MB -

Data

Mitogenome DNA sequence alignments (in multi-fasta format) generated in the present study for the 1142 samples from the Anopheles gambiae 1000 genome project (2020). Sample ID are as detailed in Table S2 of the paper. Note that the control region is excluded from the alignment (s...

Romero_et_al_GBE2024_Romero_pipeline_AGC_Fontaine_etal_2015_final_alignment_new_header_no_loop_no_insertions_only_coding_80seq.fasta

Unknown - 1.1 MB -

Data

Mitogenome DNA sequence alignments (in multi-fasta format) generated in the present study for the samples of the Anopheles gambiae complex from Fontaine et al. 2015, and the two outgroup species (Anopheles chrsityi and Anopheles epiroticus). Sample ID are as detailed in Table S1...

0_ReadMe.txt

Aug 5, 2024 - Supplementary data for: Transpiration efficiency variations in the pearl millet reference collection PMiGAP

Plain Text - 2.1 KB -

Documentation

Data citation, description and terms of use

RawData_PearlMillet_2012.tab

Aug 5, 2024 - Supplementary data for: Transpiration efficiency variations in the pearl millet reference collection PMiGAP

Tabular Data - 416.7 KB - 47 Variables, 1300 Observations -

Data

Raw data file for 2012 (tsv data file)

RawData_PearlMillet_2013.tab

Aug 5, 2024 - Supplementary data for: Transpiration efficiency variations in the pearl millet reference collection PMiGAP