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Publication Status: Published

1,521 to 1,530 of 8,235 Results

IRGSP.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 125.9 MB - MD5: 7d668cc43cd5f8b53beeb6d3b14c49a8 Data Result of the second transfer by GrAnnoT for the back and forth comparison with Liftoff.
IRGSP.gff3 Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 94.1 MB - MD5: 3915d5c78227d058a36a871a992c4f5d Data Result of the second transfer by Liftoff for the back and forth comparison with GrAnnoT.
liftoff_transfer_chm13_to_grch38.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 160.9 MB - MD5: a944747959786332e338b42bce913de8 Data Result of the human Chr1 annotation transfer by Liftoff
odgi_transfer_nb_azu.bed Mar 10, 2025 - Output from the analysis described in GrAnnoT paper PLINK Binary - 187.8 MB - MD5: 8070e80fde5899d58b0ec16189b488a8 Data Result of the ODGI transfer between Nipponbare and AzucenaRS1 through the pangenome graph.
Os117425RS1.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 113.3 MB - MD5: 76e7db440455ca21bed9758664eb69f5 Data Result of GrAnnoT annotation transfer from Nipponbare (IRGSP).
Os117425RS1_named.db.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 115.4 MB - MD5: 447841c462c35690f4ad0dbcfab1d908 Data Result of Liftoff annotation transfer from Nipponbare (IRGSP), in database mode.
Os117425RS1_named.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 115.4 MB - MD5: 2d91cee4340911c6329c4f8ab0832cc1 Data Result of Liftoff annotation transfer from Nipponbare (IRGSP).
Os117425RS1_named_unmappeddb.txt Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 35.4 KB - MD5: 1522443fb9f6f2b75b7d11f505e9da93 Data File produced by Liftoff during annotation transfer.
Os117425RS1_named_unmapped.txt Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 35.4 KB - MD5: d6872b91cdbfcf903bec188b3ed5f808 Data File produced by Liftoff during annotation transfer.
Os125619RS1.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 105.7 MB - MD5: d77e1b53493285321893fcab69264297 Data Result of GrAnnoT annotation transfer from Nipponbare (IRGSP).

IRGSP.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 125.9 MB -

Data

Result of the second transfer by GrAnnoT for the back and forth comparison with Liftoff.

IRGSP.gff3

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 94.1 MB -

Data

Result of the second transfer by Liftoff for the back and forth comparison with GrAnnoT.

liftoff_transfer_chm13_to_grch38.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 160.9 MB -

Data

Result of the human Chr1 annotation transfer by Liftoff

odgi_transfer_nb_azu.bed

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

PLINK Binary - 187.8 MB -

Data

Result of the ODGI transfer between Nipponbare and AzucenaRS1 through the pangenome graph.

Os117425RS1.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 113.3 MB -

Data

Result of GrAnnoT annotation transfer from Nipponbare (IRGSP).

Os117425RS1_named.db.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 115.4 MB -

Data

Result of Liftoff annotation transfer from Nipponbare (IRGSP), in database mode.

Os117425RS1_named.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 115.4 MB -

Data

Result of Liftoff annotation transfer from Nipponbare (IRGSP).

Os117425RS1_named_unmappeddb.txt

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 35.4 KB -

Data

File produced by Liftoff during annotation transfer.

Os117425RS1_named_unmapped.txt

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 35.4 KB -

Data

File produced by Liftoff during annotation transfer.

Os125619RS1.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 105.7 MB -

Data

Result of GrAnnoT annotation transfer from Nipponbare (IRGSP).

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