Research Unit "Host-Vector-Parasite-Environment Interactions in Neglected Tropical Diseases due to Trypanosomatids"

(in French : Unité Mixte de Recherche "Interactions Hôte-Vecteur-Parasite-Environnement dans les maladies tropicales négligées dues aux Trypanosomatidae")

INTERTRYP is a joint research unit (IRD/CIRAD) based in Montpellier, dedicated to the control of human and animal diseases caused by Trypanosomatids. INTERTRYP is a Collaborating Center of the WHO for the Human African Trypanosomiasis. The Cirad via INTERTRYP is the Reference Laboratory of the OIE on the "Animal African Trypanosomoses".

Scientific project. With its partners in Europe and in the South countries, INTERTRYP conducts an integrated approach of the different actors of the trypanosomatidae cycle (human and animal host/parasite/vector/symbiont bacteria/ environment/climate) and their interactions in order to diagnose, analyze, develop and make available methods of control and elimination of these diseases to partners in the South and neglected populations.
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results_by_locus.tar.gz
Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms
Gzip Archive - 57.4 KB - MD5: bc0523cb28578e7a67b72d961b2092e7
Pipeline output, results by locus
RJSU6DXE013-Alignment.txt.gz
Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms
Gzip Archive - 88.8 KB - MD5: b33119454d0bc0a87b0ad6b1de5e40fe
Blast result, input for metaXplor
samples.txt.gz
Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms
Gzip Archive - 104 B - MD5: 695aa82b79975f82ded83af665659247
List file with the name of the analysed samples.
scripts.tar.gz
Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms
Gzip Archive - 11.7 KB - MD5: f4b7789ad6ae48e3ce19b336974b9d50
Used command line to process the test data (pipeline output).
tmp_files.tar.gz
Jan 11, 2024 - mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms
Gzip Archive - 258.7 MB - MD5: ca56ac6f52c700a8ac80dbf345b1565c
Temporary files, pipeline output.
Application of biomolecular techniques on tsetse fly puparia for species identification
Oct 20, 2023
Gimonneau, Geoffrey; Robert Eustache, Hounyèmè; Myra, Quartey; Ernest, Salou; Sophie,Ravel; Alain Boulangé, 2023, "Application of biomolecular techniques on tsetse fly puparia for species identification", https://doi.org/10.18167/DVN1/IMKEEM, CIRAD Dataverse
Experimental results and script for statistical analyses related to the paper entitled "Application of biomolecular techniques on tsetse fly puparia for species identification". The study investigated whether a reliable molecular identification of tsetse species can be made from...
This dataset is harvested from another repository. The link will take you directly to the source of the data.
SpeSerTryp_ICF_AF_19apr2022_FR.pdf
SpeSerTryp_ICF_AF_19apr2022_FR.pdf
Nov 7, 2022 - Prospective evaluation of the specificity of serological tests for Human African Trypanosomiasis: documentation and data
Adobe PDF - 240.9 KB - MD5: 7312d18864a1bb6bdd6f8fc4788f448a
Documentation
Informed consent form and assent form (in French), PDF version
SpeSerTryp_Protocol_19apr2022_FR.pdf
SpeSerTryp_Protocol_19apr2022_FR.pdf
Nov 7, 2022 - Prospective evaluation of the specificity of serological tests for Human African Trypanosomiasis: documentation and data
Adobe PDF - 699.5 KB - MD5: f454f320ca38fece7b7f4c84d8ce069e
Documentation
Study protocol (in French), PDF version
Passive case detection of Human African Trypanosomiasis in Guinea: symptoms and signs, rapid diagnostic test results and laboratory test results
Passive case detection of Human African Trypanosomiasis in Guinea: symptoms and signs, rapid diagnostic test results and laboratory test results
Oct 13, 2022 - DiTECT-HAT-WP2
Lejon, Veerle; Camara, Oumou; Camara, Mamadou; Ilboudo, Hamidou; Kaboré, Jacques; Compaoré, Charlie Franck Alfred; Buscher, Philippe; Bucheton, Bruno, 2022, "Passive case detection of Human African Trypanosomiasis in Guinea: symptoms and signs, rapid diagnostic test results and laboratory test results", https://doi.org/10.23708/ZDD0OW, DataSuds, V1, UNF:6:5xfmuyoW9wsYi66d23V96w== [fileUNF]
In the last decade, the prevalence of Trypanosoma brucei gambiense human African trypanosomiasis (HAT) has fallen and HAT has been targeted for elimination. At low disease prevalence, integration of case finding into routine activities of peripheral health centres becomes crucial...
DiTECT-HAT-WP2-GN-deidentified-2022-10-12 Metadata.docx
Oct 13, 2022 - Passive case detection of Human African Trypanosomiasis in Guinea: symptoms and signs, rapid diagnostic test results and laboratory test results
MS Word - 16.0 KB - MD5: 9fa7421eb9c0fc53ff7ab8e054087e19
Documentation
Metadata of data file DiTECT-HAT-WP2-GN-deidentified-2022-10-12 (data dictionary, in French and in English)
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