gratools

This dataverse contains codes and data related to the GraTools software

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1 to 10 of 98 Results

Data used in the gratools paper Mar 6, 2026 Sabot, Francois, 2026, "Data used in the gratools paper", https://doi.org/10.23708/SOTLQU, DataSuds, V1 These are the data (mostly Pangenome variation graphs) that were used in the gratools paper only. The file is the Zenodo DOI link for the thre graphs.
ZenodoLinks.txt Mar 6, 2026 - Data used in the gratools paper Plain Text - 24 B - MD5: 1446b67cc3a41151413b63dc00dfccfa This is the Zenodo DOI for graphs from Bathycoccus, 20 arabidopsis and 69 arabidopsis
Code source for GraTools v1.1.0 Mar 6, 2026 Sabot, Francois, 2026, "Code source for GraTools v1.1.0", https://doi.org/10.23708/DXOP8N, DataSuds, V1 This code is the original source code submitted for GraTools in March 2026. This is a dump of the IRD Forge git, master branch
.gitignore Mar 6, 2026 - Code source for GraTools v1.1.0 Unknown - 3.5 KB - MD5: e826742d2978c7cbcf5ba057ec007d3d
.gitlab-ci.yml Mar 6, 2026 - Code source for GraTools v1.1.0 Unknown - 7.2 KB - MD5: c86ab1cce13a441f0886e427de1f7567
.readthedocs.yml Mar 6, 2026 - Code source for GraTools v1.1.0 Unknown - 646 B - MD5: 0a75d13879467ee774c4c4c9311d9a8f
bash_completion.sh Mar 6, 2026 - Code source for GraTools v1.1.0 Shell Script - 684 B - MD5: a825ebf2fcbb1deab0311b90757cfc95
ContributionGuide.md Mar 6, 2026 - Code source for GraTools v1.1.0 Markdown Text - 3.4 KB - MD5: e63cdd21f5430aa38ba16df3cd0c9412
Dockerfile Mar 6, 2026 - Code source for GraTools v1.1.0 Docker Image File - 702 B - MD5: 22d3b90fba885f35ace5af4ff77079df
gratools_rice_analysis_commands.md Mar 6, 2026 - Code source for GraTools v1.1.0 Markdown Text - 41.8 KB - MD5: 6ecef9f6378b6d7ba88fe10a6a08b2c3

Data used in the gratools paper

Mar 6, 2026

Sabot, Francois, 2026, "Data used in the gratools paper", https://doi.org/10.23708/SOTLQU, DataSuds, V1

These are the data (mostly Pangenome variation graphs) that were used in the gratools paper only. The file is the Zenodo DOI link for the thre graphs.

ZenodoLinks.txt

Mar 6, 2026 - Data used in the gratools paper

Plain Text - 24 B -

This is the Zenodo DOI for graphs from Bathycoccus, 20 arabidopsis and 69 arabidopsis

Code source for GraTools v1.1.0

Mar 6, 2026

Sabot, Francois, 2026, "Code source for GraTools v1.1.0", https://doi.org/10.23708/DXOP8N, DataSuds, V1

This code is the original source code submitted for GraTools in March 2026. This is a dump of the IRD Forge git, master branch

.gitignore

Mar 6, 2026 - Code source for GraTools v1.1.0

Unknown - 3.5 KB -

.gitlab-ci.yml

Mar 6, 2026 - Code source for GraTools v1.1.0

Unknown - 7.2 KB -

.readthedocs.yml

Mar 6, 2026 - Code source for GraTools v1.1.0

Unknown - 646 B -

bash_completion.sh

Mar 6, 2026 - Code source for GraTools v1.1.0

Shell Script - 684 B -

ContributionGuide.md

Mar 6, 2026 - Code source for GraTools v1.1.0

Markdown Text - 3.4 KB -

Dockerfile

Mar 6, 2026 - Code source for GraTools v1.1.0

Docker Image File - 702 B -

gratools_rice_analysis_commands.md

Mar 6, 2026 - Code source for GraTools v1.1.0

Markdown Text - 41.8 KB -

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