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101 to 110 of 266 Results

sub_sequences.dot Mar 6, 2026 - Code source for GraTools v1.1.0 MS Word - 1.6 KB - MD5: 71498bc0ee28efc507fee6a4f5fcdc76
tree_data_test.png Mar 6, 2026 - Code source for GraTools v1.1.0 PNG Image - 40.4 KB - MD5: c6c51f5b1db857f14a876a096f2a501d
usecase1_graph_description.rst Mar 6, 2026 - Code source for GraTools v1.1.0 Unknown - 4.1 KB - MD5: f03b50fbc65d33335f1f80cb26858568
usecase2_subgraph_fasta_extraction.rst Mar 6, 2026 - Code source for GraTools v1.1.0 Unknown - 5.7 KB - MD5: ce1d11db1bdf498fe991bce82bd53812
usecase3_core_dispensable_groups.rst Mar 6, 2026 - Code source for GraTools v1.1.0 Unknown - 11.5 KB - MD5: 6776296a620afa02dbf44276ac52c396
usecase4_advanced_pangenome_size.rst Mar 6, 2026 - Code source for GraTools v1.1.0 Unknown - 5.5 KB - MD5: 9d8ebc8e68f4630c7aeb7a415f5377e6
useful_function.py Mar 6, 2026 - Code source for GraTools v1.1.0 Python Source Code - 10.1 KB - MD5: 38b1577819a4541c067129a2880140e7
venn_gratools.py Mar 6, 2026 - Code source for GraTools v1.1.0 Python Source Code - 2.8 KB - MD5: c94ce2c9d8b8d36108bb1f1f41e19704
venn_jap_ind_core.png Mar 6, 2026 - Code source for GraTools v1.1.0 PNG Image - 95.7 KB - MD5: 7c43397a420dc9dd4eb5d871723198ec
Data used for the analysis described in GrAnnoT paper Oct 29, 2025 - GrAnnoT data and output Marthe, Nina; Sabot, Francois, 2025, "Data used for the analysis described in GrAnnoT paper", https://doi.org/10.23708/DO1RTF, DataSuds, V6 GrAnnoT is an annotation transfer tool for pangenome graph. It was tested and compared to other approaches, and the data necessary for these tests is available in this dataset. It includes mainly pangenome graphs, genomes, and annotations.

sub_sequences.dot

Mar 6, 2026 - Code source for GraTools v1.1.0

MS Word - 1.6 KB -

tree_data_test.png

Mar 6, 2026 - Code source for GraTools v1.1.0

PNG Image - 40.4 KB -

usecase1_graph_description.rst

Mar 6, 2026 - Code source for GraTools v1.1.0

Unknown - 4.1 KB -

usecase2_subgraph_fasta_extraction.rst

Mar 6, 2026 - Code source for GraTools v1.1.0

Unknown - 5.7 KB -

usecase3_core_dispensable_groups.rst

Mar 6, 2026 - Code source for GraTools v1.1.0

Unknown - 11.5 KB -

usecase4_advanced_pangenome_size.rst

Mar 6, 2026 - Code source for GraTools v1.1.0

Unknown - 5.5 KB -

useful_function.py

Mar 6, 2026 - Code source for GraTools v1.1.0

Python Source Code - 10.1 KB -

venn_gratools.py

Mar 6, 2026 - Code source for GraTools v1.1.0

Python Source Code - 2.8 KB -

venn_jap_ind_core.png

Mar 6, 2026 - Code source for GraTools v1.1.0

PNG Image - 95.7 KB -

Data used for the analysis described in GrAnnoT paper

Oct 29, 2025 - GrAnnoT data and output

Marthe, Nina; Sabot, Francois, 2025, "Data used for the analysis described in GrAnnoT paper", https://doi.org/10.23708/DO1RTF, DataSuds, V6

GrAnnoT is an annotation transfer tool for pangenome graph. It was tested and compared to other approaches, and the data necessary for these tests is available in this dataset. It includes mainly pangenome graphs, genomes, and annotations.

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