PANEEC Team

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101 to 110 of 153 Results

OsIR64RS1_named_unmappeddb.txt Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 51.4 KB - MD5: 8dbac09fdbd22c7f6960e1261533b583 Data File produced by Liftoff during annotation transfer.
OsIR64RS1_named_unmapped.txt Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 51.4 KB - MD5: 3e243d763300e956e9e7b10cd36445e0 Data File produced by Liftoff during annotation transfer.
PAV_matrix.txt Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 2.1 MB - MD5: a67aa4c80fb648e2586beff20acc3b3f Data PAV matrix resulting from GrAnnoT annotation transfer from Nipponbare (IRGSP) to all the rice genomes embbeded in the pangenome graph.
readme_outputs.txt Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 4.7 KB - MD5: 96b3b158184af284e59d5cceb5e3dfd3 Documentation Contains a description of all folders in this dataset.
reference_all_genes.fa Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 4.3 MB - MD5: 0d8eea6e736f370b2c3fb6237d746232 Data Intermediate file produced by Liftoff during the E.coli annotation transfer.
reference_all_genes.fa Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 229.8 MB - MD5: 40ebe8ac4299a91fbcc080e0a35e725e Data Intermediate file produced by Liftoff during the human Chr1 annotation transfer.
reference_all_to_target_all.sam Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 250.2 MB - MD5: da6adfa01f20e09d1f881ecf62d8ca71 Data Intermediate file produced by Liftoff during the human Chr1 annotation transfer.
reference_all_to_target_all.sam Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 5.4 MB - MD5: 03cc2784baaa0390c71efb85d1c3e9cc Data Intermediate file produced by Liftoff during the E.coli annotation transfer.
unmapped_features.txt Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 57.8 KB - MD5: c601b2cd1df7caed7c8ba9ae52225fbe Data File produced by Liftoff during the human Chr1 annotation transfer
unmapped_features.txt Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 9.4 KB - MD5: 0a85d666947893338681208691cc96de Data File produced by Liftoff during the E.coli annotation transfer.

OsIR64RS1_named_unmappeddb.txt

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 51.4 KB -

Data

File produced by Liftoff during annotation transfer.

OsIR64RS1_named_unmapped.txt

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 51.4 KB -

Data

File produced by Liftoff during annotation transfer.

PAV_matrix.txt

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 2.1 MB -

Data

PAV matrix resulting from GrAnnoT annotation transfer from Nipponbare (IRGSP) to all the rice genomes embbeded in the pangenome graph.

readme_outputs.txt

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 4.7 KB -

Documentation

Contains a description of all folders in this dataset.

reference_all_genes.fa

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 4.3 MB -

Data

Intermediate file produced by Liftoff during the E.coli annotation transfer.

reference_all_genes.fa

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 229.8 MB -

Data

Intermediate file produced by Liftoff during the human Chr1 annotation transfer.

reference_all_to_target_all.sam

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 250.2 MB -

Data

Intermediate file produced by Liftoff during the human Chr1 annotation transfer.

reference_all_to_target_all.sam

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 5.4 MB -

Data

Intermediate file produced by Liftoff during the E.coli annotation transfer.

unmapped_features.txt

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 57.8 KB -

Data

File produced by Liftoff during the human Chr1 annotation transfer

unmapped_features.txt

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 9.4 KB -

Data

File produced by Liftoff during the E.coli annotation transfer.

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