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121 to 130 of 266 Results

AzucenaRS1_filter80.gff Oct 29, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 115.0 MB - MD5: 56eceffb04dda9e7fbe0e48972befc9d Annotation transfer on AzucenaRS1 with coverage and sequence identity filters at 80%
AzucenaRS1_filter90.gff Oct 29, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 113.7 MB - MD5: 849a84800d8a3cea65e146e8ecf4eda5 Annotation transfer on AzucenaRS1 with coverage and sequence identity filters at 90%
AzucenaRS1_filter95.gff Oct 29, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 111.8 MB - MD5: 7224ffc601ff9b6dfd015b5bd77eb1e9 Annotation transfer on AzucenaRS1 with coverage and sequence identity filters at 95%
grannot_analysis_command_lines.txt Oct 29, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 8.1 KB - MD5: 6f5be639cf4f13c66772a12e41b711f2 Documentation Contains all the command lines used to produce the files in this dataset. The input data is available at : https://doi.org/10.23708/DO1RTF
liftoff_o157h7_to_s88.gff Oct 29, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 2.9 MB - MD5: 16c7a8c67ec05111e9d9c98e4e4b906a annotation transferred by Liftoff
readme_outputs.txt Oct 29, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 4.9 KB - MD5: 55ecaf7ec9b62c3778d5866dfde2d81b Documentation Contains a description of all folders in this dataset.
S88_fa4fe08.gff Oct 29, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 1.8 MB - MD5: 7ecf8459a73585ee129b054d09b00c20 annotation transferred by GrAnnoT
GrAnnoT source code and scripts Mar 20, 2025 - GrAnnoT Sabot, Francois; Marthe, Nina; Zytnicki, Matthias, 2025, "GrAnnoT source code and scripts", https://doi.org/10.23708/TW3KYV, DataSuds, V2 GrAnnoT is an annotation transfer tool for pangenome graph. The source code at the time of the paper submission is available in this dataset. The git repository is available at : https://forge.ird.fr/diade/dynadiv/grannot/-/tree/main
ReadMe.txt Mar 20, 2025 - GrAnnoT source code and scripts Plain Text - 516 B - MD5: 25f858eade603eac11fdeab6de8f5863 Documentation Data citation, description and terms of use
ReadMe.txt Mar 20, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 499 B - MD5: 683ef0fb3b9ffa3088f3c14f327409b3 Documentation Data citation, description and terms of use

AzucenaRS1_filter80.gff

Oct 29, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 115.0 MB -

Annotation transfer on AzucenaRS1 with coverage and sequence identity filters at 80%

AzucenaRS1_filter90.gff

Oct 29, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 113.7 MB -

Annotation transfer on AzucenaRS1 with coverage and sequence identity filters at 90%

AzucenaRS1_filter95.gff

Oct 29, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 111.8 MB -

Annotation transfer on AzucenaRS1 with coverage and sequence identity filters at 95%

grannot_analysis_command_lines.txt

Oct 29, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 8.1 KB -

Documentation

Contains all the command lines used to produce the files in this dataset. The input data is available at : https://doi.org/10.23708/DO1RTF

liftoff_o157h7_to_s88.gff

Oct 29, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 2.9 MB -

annotation transferred by Liftoff

readme_outputs.txt

Oct 29, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 4.9 KB -

Documentation

Contains a description of all folders in this dataset.

S88_fa4fe08.gff

Oct 29, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 1.8 MB -

annotation transferred by GrAnnoT

GrAnnoT source code and scripts

Mar 20, 2025 - GrAnnoT

Sabot, Francois; Marthe, Nina; Zytnicki, Matthias, 2025, "GrAnnoT source code and scripts", https://doi.org/10.23708/TW3KYV, DataSuds, V2

GrAnnoT is an annotation transfer tool for pangenome graph. The source code at the time of the paper submission is available in this dataset. The git repository is available at : https://forge.ird.fr/diade/dynadiv/grannot/-/tree/main

ReadMe.txt

Mar 20, 2025 - GrAnnoT source code and scripts

Plain Text - 516 B -

Documentation

Data citation, description and terms of use

ReadMe.txt

Mar 20, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 499 B -

Documentation

Data citation, description and terms of use

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