PANEEC Team

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41 to 50 of 153 Results

GRCh38.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 96.1 MB - MD5: 0f9debe9433625ca59709513e6d9edaf Data Result of the human Chr1 annotation transfer by GrAnnoT
IRGSP.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 125.9 MB - MD5: 7d668cc43cd5f8b53beeb6d3b14c49a8 Data Result of the second transfer by GrAnnoT for the back and forth comparison with Liftoff.
IRGSP.gff3 Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 94.1 MB - MD5: 3915d5c78227d058a36a871a992c4f5d Data Result of the second transfer by Liftoff for the back and forth comparison with GrAnnoT.
liftoff_transfer_chm13_to_grch38.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 160.9 MB - MD5: a944747959786332e338b42bce913de8 Data Result of the human Chr1 annotation transfer by Liftoff
liftoff_transfer_k12_to_0127.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 2.8 MB - MD5: 298cbbbb13e32aa780e4b050362676a6 Data Result of the E.coli annotation transfer by Liftoff.
O127_H6_E2348_69_193637c.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 2.1 MB - MD5: 84c6d4c05dcb1847bf2793919dfea9df Data Result of the E.coli annotation transfer by GrAnnoT.
odgi_transfer_nb_azu.bed Mar 10, 2025 - Output from the analysis described in GrAnnoT paper PLINK Binary - 187.8 MB - MD5: 8070e80fde5899d58b0ec16189b488a8 Data Result of the ODGI transfer between Nipponbare and AzucenaRS1 through the pangenome graph.
Os117425RS1.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 113.3 MB - MD5: 76e7db440455ca21bed9758664eb69f5 Data Result of GrAnnoT annotation transfer from Nipponbare (IRGSP).
Os117425RS1_named.db.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 115.4 MB - MD5: 447841c462c35690f4ad0dbcfab1d908 Data Result of Liftoff annotation transfer from Nipponbare (IRGSP), in database mode.
Os117425RS1_named.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 115.4 MB - MD5: 2d91cee4340911c6329c4f8ab0832cc1 Data Result of Liftoff annotation transfer from Nipponbare (IRGSP).

GRCh38.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 96.1 MB -

Data

Result of the human Chr1 annotation transfer by GrAnnoT

IRGSP.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 125.9 MB -

Data

Result of the second transfer by GrAnnoT for the back and forth comparison with Liftoff.

IRGSP.gff3

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 94.1 MB -

Data

Result of the second transfer by Liftoff for the back and forth comparison with GrAnnoT.

liftoff_transfer_chm13_to_grch38.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 160.9 MB -

Data

Result of the human Chr1 annotation transfer by Liftoff

liftoff_transfer_k12_to_0127.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 2.8 MB -

Data

Result of the E.coli annotation transfer by Liftoff.

O127_H6_E2348_69_193637c.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 2.1 MB -

Data

Result of the E.coli annotation transfer by GrAnnoT.

odgi_transfer_nb_azu.bed

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

PLINK Binary - 187.8 MB -

Data

Result of the ODGI transfer between Nipponbare and AzucenaRS1 through the pangenome graph.

Os117425RS1.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 113.3 MB -

Data

Result of GrAnnoT annotation transfer from Nipponbare (IRGSP).

Os117425RS1_named.db.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 115.4 MB -

Data

Result of Liftoff annotation transfer from Nipponbare (IRGSP), in database mode.

Os117425RS1_named.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 115.4 MB -

Data

Result of Liftoff annotation transfer from Nipponbare (IRGSP).

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