Infectious Diseases and Vectors: Ecology, Genetics, Evolution and Control

The aims of the group MIVEGEC are to develop integrative and transdisciplinary research to the mechanisms that maintain, amplify and transmit pathogenic agents, along with their genetic and epigenetic determinants, in order to better understand how these systems evolve and to improve their control.
L’UMR MIVEGEC "Maladies Infectieuses et Vecteurs : Ecologie, Génétique, Evolution et Contrôle" a pour mission de comprendre, via des recherches intégratives et transdisciplinaires, les mécanismes de maintenance, d’amplification et de transmission d’agents pathogènes, leurs déterminants génétiques et non génétiques, afin de pouvoir mieux appréhender l’évolution de ces systèmes infectieux et contribuer à en améliorer le contrôle.
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91 to 100 of 308 Results
metadataencours.tab
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Tabular Data - 330 B - 6 Variables, 6 Observations - UNF:6:G/lBLbWcA/mrI8LJUMN5ww==
Données
Excel for ViroSeek_downstream_analysis.rmd
bioawk.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 655 B - MD5: 76915c2d9c8fc0265abb386b301e7c73
Code
Modules for ViroSeek
fastp.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 1.0 KB - MD5: 954846bb0b0e5e86f08b763401828ef2
Code
Modules for ViroSeek
fastqc.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 504 B - MD5: ea6a2ab0faa9f087aaf971d78d34c5d7
Code
Modules for ViroSeek
minimap2.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 541 B - MD5: 7663be48edce58e4303d6e1b4017cde5
Code
Modules for ViroSeek
samtools.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 1.1 KB - MD5: c5246bbf7b8f446389b6dd4b2feba108
Code
Modules for ViroSeek
spades.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 637 B - MD5: 9c01725862db0c87919a61d210fbea38
Code
Modules for ViroSeek
trimgalore.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 608 B - MD5: b85ebab75a77b0fa51ff011d4e8daf9b
Code
Modules for ViroSeek
OMEES__atelierParticipatifMoustiqueTigre_Deroule.pdf
Feb 23, 2026 - Résultats d’un atelier participatif de co-construction d’un système de surveillance et d’alerte précoce pour le moustique tigre (Aedes albopictus) en Occitanie
Adobe PDF - 1.3 MB - MD5: 913a49719eaf5615dfbe3d3e34940499
Données
Document méthodologique décrivant le contexte, les objectifs, les profils de participants, le déroulé et les outils d’animation de l’atelier
OMEES__atelierParticipatifMoustiqueTigre_Donnees.pdf
Feb 23, 2026 - Résultats d’un atelier participatif de co-construction d’un système de surveillance et d’alerte précoce pour le moustique tigre (Aedes albopictus) en Occitanie
Adobe PDF - 12.6 MB - MD5: 28209c60853dbccfea14f4bf546d8bca
Données
Présentation des données produites par les différents organismes/instituts participant à l'atelier
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