Infectious Diseases and Vectors: Ecology, Genetics, Evolution and Control

The aims of the group MIVEGEC are to develop integrative and transdisciplinary research to the mechanisms that maintain, amplify and transmit pathogenic agents, along with their genetic and epigenetic determinants, in order to better understand how these systems evolve and to improve their control.
L’UMR MIVEGEC "Maladies Infectieuses et Vecteurs : Ecologie, Génétique, Evolution et Contrôle" a pour mission de comprendre, via des recherches intégratives et transdisciplinaires, les mécanismes de maintenance, d’amplification et de transmission d’agents pathogènes, leurs déterminants génétiques et non génétiques, afin de pouvoir mieux appréhender l’évolution de ces systèmes infectieux et contribuer à en améliorer le contrôle.
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151 to 160 of 269 Results
fig3.txt
Oct 2, 2023 - R script and replication data for - The paradox of plant preference: the malaria vectors Anopheles gambiae and Anopheles coluzzii select suboptimal food sources for their survival and reproduction
Plain Text - 19.1 KB - MD5: 80161ad73b661a22489dce7161105873
Data
fig4.txt
Oct 2, 2023 - R script and replication data for - The paradox of plant preference: the malaria vectors Anopheles gambiae and Anopheles coluzzii select suboptimal food sources for their survival and reproduction
Plain Text - 119.9 KB - MD5: 0339fdd5a8a7c29452031189c1f2030b
Data
fig5.txt
Oct 2, 2023 - R script and replication data for - The paradox of plant preference: the malaria vectors Anopheles gambiae and Anopheles coluzzii select suboptimal food sources for their survival and reproduction
Plain Text - 39.0 KB - MD5: f626ebdd4d660c72fa0fa7ffddb25778
Data
fig6a.txt
Oct 2, 2023 - R script and replication data for - The paradox of plant preference: the malaria vectors Anopheles gambiae and Anopheles coluzzii select suboptimal food sources for their survival and reproduction
Plain Text - 23.9 KB - MD5: 8ea03ef61391f529a965bb6ab5da5cf3
Data
ReadMe.txt
Oct 2, 2023 - R script and replication data for - The paradox of plant preference: the malaria vectors Anopheles gambiae and Anopheles coluzzii select suboptimal food sources for their survival and reproduction
Plain Text - 1.6 KB - MD5: 237623e421273ffd68a50c4871c47933
Data citation and description
R_script_Performance_Preference-1.R
Oct 2, 2023 - R script and replication data for - The paradox of plant preference: the malaria vectors Anopheles gambiae and Anopheles coluzzii select suboptimal food sources for their survival and reproduction
R Syntax - 11.3 KB - MD5: 590c1eba9e6b9da116451da85a5611bc
CodeDocumentation
R script and data dictionary to replicate the analyses. Code developed by Prisca Paré and Thierry Lefevre
Replication data and scripts for: Harbor porpoise losing its edge: genetic time series suggests a rapid population decline in Iberian waters over the last 30 years
Replication data and scripts for: Harbor porpoise losing its edge: genetic time series suggests a rapid population decline in Iberian waters over the last 30 years
Sep 22, 2023 - Porpoises genetics and genomics
Ben Chehida, Hédi Yacine; Stelwagen, Tjibbe; Hoekendijk, Jeroen; Ferreira, Marisa; Eira, Catarina; Pereira, Andreia T.; Nicolau, Lidia; Fontaine, Michael, 2023, "Replication data and scripts for: Harbor porpoise losing its edge: genetic time series suggests a rapid population decline in Iberian waters over the last 30 years", https://doi.org/10.23708/GOPRGV, DataSuds, V1
Data and scripts related to the study Ben Chehida Y, Stelwagen T, Hoekendijk JPA, Ferreira M, Eira C, Pereira AT, Nicolau L, Thumloup J, Fontaine MC. 2023. Harbor porpoise losing its edges: genetic time series suggests a rapid population decline in Iberian waters over the last 30...
ABC.tar.gz
Sep 22, 2023 - Replication data and scripts for: Harbor porpoise losing its edge: genetic time series suggests a rapid population decline in Iberian waters over the last 30 years
Gzip Archive - 10.3 MB - MD5: d32b0bbf2afabe5602cdfb5e6347f7db
CodeData
Input data and scripts required to replicate the demographic inference by Approximate Bayesian Computation (ABC) using the FastSimcoal coalescent simulator, arlumstat, and the abcrf R package. To uncompress, type "tar xzvf ABC.tar.gz"
Alignments.tar.gz
Sep 22, 2023 - Replication data and scripts for: Harbor porpoise losing its edge: genetic time series suggests a rapid population decline in Iberian waters over the last 30 years
Gzip Archive - 19.7 KB - MD5: cd98e94dec3f1ce700286915ecb8631e
Data
Mitochondrial DNA sequence alignments generated in the present study. Nexus (with unique haplotypes) and FASTA alignment are provided. To uncompress, type "tar xzvf Alignments.tar.gz"
BenChehida_et_al2023_Iberian_porpoises_mtDNA_README.txt
Sep 22, 2023 - Replication data and scripts for: Harbor porpoise losing its edge: genetic time series suggests a rapid population decline in Iberian waters over the last 30 years
Plain Text - 3.3 KB - MD5: bba418785eee201deba36e13b6c4c8fb
Documentation
Dataset description, citation and terms of use
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