Infectious Diseases and Vectors: Ecology, Genetics, Evolution and Control

The aims of the group MIVEGEC are to develop integrative and transdisciplinary research to the mechanisms that maintain, amplify and transmit pathogenic agents, along with their genetic and epigenetic determinants, in order to better understand how these systems evolve and to improve their control.
L’UMR MIVEGEC "Maladies Infectieuses et Vecteurs : Ecologie, Génétique, Evolution et Contrôle" a pour mission de comprendre, via des recherches intégratives et transdisciplinaires, les mécanismes de maintenance, d’amplification et de transmission d’agents pathogènes, leurs déterminants génétiques et non génétiques, afin de pouvoir mieux appréhender l’évolution de ces systèmes infectieux et contribuer à en améliorer le contrôle.
Featured Dataverses

In order to use this feature you must have at least one published or linked dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

Advanced Search

11 to 20 of 246 Results
virus_mini_config.ini
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Unknown - 1.0 KB - MD5: e9e88231f8769d4d40be1d77a9dbb801
Code
Companion file for CAMISIM_script.sh
Metadenovo.sh
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Shell Script - 415 B - MD5: 3c765273fb00cff6b336606f9ff8a1ba
Code
Metadenovo command script when tested in this study.
metadenovo_db.tab
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Tabular Data - 276 B - 6 Variables, 1 Observations - UNF:6:suOpByxClQwSuKRC5Qn/qw==
Données
Metadenovo database input file, companion of Metadenovo.sh
metadenovo_input.tab
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Tabular Data - 733 B - 3 Variables, 5 Observations - UNF:6:tyuLW2kmYZtk+8pIMV/RPQ==
Données
Metadenovo samples input file, companion of Metadenovo.sh
Taxprofiler.sh
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Shell Script - 532 B - MD5: 0b1dba73a89694a8786f937eeffec0e4
Code
Taxprofiler command script.
taxprofiler_db.tab
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Tabular Data - 186 B - 4 Variables, 1 Observations - UNF:6:owXJ1TE2Pl/ttHdbzldF6g==
Données
taxprofiler database input file, companion file of Taxprofiler.sh.
taxprofiler_input.tab
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Tabular Data - 828 B - 6 Variables, 5 Observations - UNF:6:K/XMHKnbfbWmNFfjnqG7CA==
Données
taxprofiler samples input file, companion file of Taxprofiler.sh.
taxprof_ressouces.config
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Unknown - 103 B - MD5: 653be8d086a3fe012cc314f1778222d6
Code
Configuration file for Taxprofiler execution, companion file of Taxprofiler.sh.
Viroseek.sh
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Shell Script - 537 B - MD5: 5f26695e80c215ec06a2d729eb968035
Code
ViroSeek command script, used in this study.
ViroSeek_input.tab
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Tabular Data - 733 B - 3 Variables, 5 Observations - UNF:6:tyuLW2kmYZtk+8pIMV/RPQ==
Données
ViroSeek samples input file, companion file of Viroseek.sh.
Add Data

Log in to create a dataverse or add a dataset.

Log In
Share Dataverse

Share this dataverse on your favorite social media networks.

Link Dataverse
Reset Modifications

Are you sure you want to reset the selected metadata fields? If you do this, any customizations (hidden, required, optional) you have done will no longer appear.