Plant Health Institute of Montpellier

Among the interactions between the plant and its environment (microbial organisms or insects, whether pathogenic or beneficial), the research unit studies those that have an impact on plant health, growth and productivity. The unit is organized in 4 research departments:
  • Plant-pathogen interactions (ITEM)
  • Plant-vector-pathogen interactions (VIROM)
  • Towards an understanding of the phytobiome (PHYTOBIOM)
  • Understanding epidemics in the field (PRISM)
Featured Dataverses

In order to use this feature you must have at least one published dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

Advanced Search

31 to 40 of 77 Results
Data_RYMV_BF_Samples_Dataset.tab
Mar 23, 2023 - Yellow mottle disease epidemiology: RYMV specific detection in field-collected leaves from western Burkina Faso (2015-2019)
Tabular Data - 77.3 KB - 9 Variables, 1317 Observations - UNF:6:sPlXi/4dgpiIJ4xOW7/omQ==
Data
Sample data
Analyses of the rice (Oryza spp.) transcriptome during infection with the root-knot nematode (Meloidogyne graminicola)
Dec 23, 2022
Fernandez, Diana; Petitot, Anne-Sophie; Dereeper, Alexis, 2022, "Analyses of the rice (Oryza spp.) transcriptome during infection with the root-knot nematode (Meloidogyne graminicola)", https://doi.org/10.23708/1VFBVT, DataSuds, V1, UNF:6:QdPgnoH1UIS4e41AVlHNbw== [fileUNF]
The root-knot nematode Meloidogyne graminicola is responsible for production losses in rice (Oryza sativa) in Asia and Latin America. The accession TOG5681 of African rice, O. glaberrima, presents improved resistance to several biotic and abiotic factors, including nematodes. The...
DataSuds_1VFBVT_dataset_summary.txt
Dec 23, 2022 - Analyses of the rice (Oryza spp.) transcriptome during infection with the root-knot nematode (Meloidogyne graminicola)
Plain Text - 2.7 KB - MD5: fd4d0b324aab973b0db812a4745a77e4
Documentation
Dataset citation, description and file list
EdgeR_OrysaRetS_2a8dpi.tab
Dec 23, 2022 - Analyses of the rice (Oryza spp.) transcriptome during infection with the root-knot nematode (Meloidogyne graminicola)
Tabular Data - 23.2 MB - 40 Variables, 55986 Observations - UNF:6:6TdpbH6boxsC/lGc0eDsGA==
Data
Differential gene expression in Oryza sativa (Nipponbarre) and Oryza glaberrima (TOG5681) at 2, 4, and 8 days after infection with the root-knot nematode Meloidogyne graminicola [Excel format]
EdgeR_Osativa_2a16dpi.tab
Dec 23, 2022 - Analyses of the rice (Oryza spp.) transcriptome during infection with the root-knot nematode (Meloidogyne graminicola)
Tabular Data - 8.4 MB - 26 Variables, 55986 Observations - UNF:6:WGTRzIudb5vo+urhLeUWPw==
Data
Differential gene expression in Oryza sativa (Nipponbarre) at 2, 4, 8, 12 and 16 days after infection with the root-knot nematode Meloidogyne graminicola [Excel format]
Nipponbare_Mgraminicola_htseqcount.tab
Dec 23, 2022 - Analyses of the rice (Oryza spp.) transcriptome during infection with the root-knot nematode (Meloidogyne graminicola)
Tabular Data - 2.7 MB - 13 Variables, 55986 Observations - UNF:6:sVoUBUjXN63uMbhJP4mGuw==
Data
Counts data of Oryza sativa (Nipponbarre) gene expression after infection with the root-knot nematode Meloidogyne graminicola
TOG5681_Mgraminicola_htseqcount.tab
Dec 23, 2022 - Analyses of the rice (Oryza spp.) transcriptome during infection with the root-knot nematode (Meloidogyne graminicola)
Tabular Data - 2.1 MB - 9 Variables, 55986 Observations - UNF:6:bAf8x9FEAFp156gwRrPU0w==
Data
Counts data of Oryza glaberrima (TOG5681) gene expression after infection with the root-knot nematode Meloidogyne graminicola
Analyses of the root-knot nematode (Meloidogyne graminicola) transcriptome during rice (Oryza spp.) infection
Dec 21, 2022
Fernandez, Diana; Petitot, Anne-Sophie; Dereeper, Alexis, 2022, "Analyses of the root-knot nematode (Meloidogyne graminicola) transcriptome during rice (Oryza spp.) infection", https://doi.org/10.23708/CTTFQW, DataSuds, V1, UNF:6:RP6B9JcVkkPIxyMZCSMH3Q== [fileUNF]
The plant-parasitic nematode Meloidogyne graminicola causes considerable damages to rice (Oryza sativa) culture. Resistance to M. graminicola in the related species Oryza glaberrima reduces root penetration by juveniles and stops further nematode development. M. graminicola genes...
44137Mg_blast_edgeR.tab
Dec 21, 2022 - Analyses of the root-knot nematode (Meloidogyne graminicola) transcriptome during rice (Oryza spp.) infection
Tabular Data - 41.9 MB - 74 Variables, 44137 Observations - UNF:6:RP6B9JcVkkPIxyMZCSMH3Q==
Data
Count data and differential expression of 44137 Meloidogyne graminicola genes in transcriptomes obtained during rice (O. sativa or O. glaberrima) infection
Mg_v2_44137contigs.fasta
Dec 21, 2022 - Analyses of the root-knot nematode (Meloidogyne graminicola) transcriptome during rice (Oryza spp.) infection
Unknown - 52.9 MB - MD5: 27fd7d803dc6c8351409dc2881a00096
Data
Nucleotide sequences of 44137 Meloidogyne graminicola genes
Add Data

Log in to create a dataverse or add a dataset.

Log In
Share Dataverse

Share this dataverse on your favorite social media networks.

Link Dataverse
Reset Modifications

Are you sure you want to reset the selected metadata fields? If you do this, any customizations (hidden, required, optional) you have done will no longer appear.