DYNADIV Team

The main focus of DYNADIV Team is
tounderstand how biodiversity of tropical plants is shaped through evolutionary forces resulting from human and environmental impacts.

Its activity is essentially based on population genetics but also integrates a multidisciplinary approach including ecology, botany, molecular phylogenetics and anthropology. It is structured around three axes:

Evolutionary history & domestication;
Diversity & conservation;
Global changes, diversity & adaptation.

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101 to 110 of 114 Results

Morphometrics_date_palm_seeds_readme.txt Sep 27, 2023 - Origins and evolution of oasis agriculture in the Sahara: morphometric measurements of archaeological and modern date palm seeds Plain Text - 2.3 KB - MD5: 1381587b6dd4ffa973924d0b42d7625d Documentation Dataset citation and description.
Traditional_morphometric_measurements_Libyan_seeds.tab Sep 27, 2023 - Origins and evolution of oasis agriculture in the Sahara: morphometric measurements of archaeological and modern date palm seeds Tabular Data - 18.7 KB - 7 Variables, 312 Observations - UNF:6:bVwT1LHfsVecioUynek+gA== Data Morphometric measurements (length, width, ...) of archeological date palm seeds from Libya. The column "Site" corresponds to the archaeological sites: "GHI" = Ghirza; "ZIN" = Zinkekra.
Traditional_morphometric_measurements_reference_collection.tab Sep 27, 2023 - Origins and evolution of oasis agriculture in the Sahara: morphometric measurements of archaeological and modern date palm seeds Tabular Data - 421.6 KB - 8 Variables, 6541 Observations - UNF:6:aE017VmluAyHQW29h/DEkQ== Data Morphometric measurements (length, width, ...) of seeds from 328 modern date palms
Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data Jul 12, 2023 Kaczmarek, Thomas; Causse, Sandrine; Abdul, Suleiman Dangana; Abraham, Solomon; Achigan-Dako, Enoch G.; Adje, Charlotte; Adjebeng-Danquah, Joseph; Agyare, Richard Y.; Akanvou, Louise; Bakasso, Yacoubou; Barry, Mamadou B.; Bonsu, Samuel K.; Calatayud, Caroline; Conde, Soukeye; Couderc, Marie; Dachi, Stephen N.; Diallo, T; Diop, Baye M.; Deu, Monique; Gueye, Mame C.; Ibrahim Bio Yerima, Abdou R.; Issah, Abdul R; Kane, Ndjido Ardo; Kombiok, James M.; Ngom, Ablaye; Noyer, Jean-Louis; Olodo, Katina; Oselebe, Happiness O.; Pham, Jean-Louis; Picquet, Marie; Puozaa, Doris K.; Rivallan, Ronan; Saidou, Sani; Sekloka, Emmanuel; Tengey, Theophilus K.; Uyoh, Edak; Vancoppenolle, Sylvie; Vigouroux, Yves; Zekraoui, Leila; Leclerc, Christian; Barnaud, Adeline; Billot, Claire, 2023, "Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data", https://doi.org/10.23708/TX5DE2, DataSuds, V1, UNF:6:3fJ9FCQhz8EPtGubWUVcZA== [fileUNF] Neglected and under-utilized species represent important genetic resources and untapped reservoirs of diversity to address global food and nutrition challenges. Characterizing the extent of their genetic diversity and making it available is of prime importance to their wider use...
FONIO_LIST_2372ID.tab Jul 12, 2023 - Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data Tabular Data - 166.9 KB - 7 Variables, 2372 Observations - UNF:6:EA1GdWbKlAxvARCWP3v3wg== Data List of the 2372 white fonio collection with passport information (country, project, geographical coordinates, year of sampling). A column indicates whether the accession was included or not in the genetic analyses. Clones are also indicated.
SSRs_DATA_FONIO_1539ID.tab Jul 12, 2023 - Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data Tabular Data - 294.4 KB - 20 Variables, 1539 Observations - UNF:6:nqX4D5T4z/xl5aC5ZR319A== DataGenomics SSRs data and passport information (including geographical coordinates) for the 1539 fonio accessions successfully genotyped.
SSRs_DATA_FONIO_README.txt Jul 12, 2023 - Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data Plain Text - 2.4 KB - MD5: 9e6891c5735fcc1df88d462203fa664d Documentation Dataset summary
Genotypic and phenotypic data for Rice hoja blanca disease resistance QTL analysis May 24, 2023 Silva, Alexander; Montoya, María Elker; Quintero, Constanza; Cuasquer, Juan; Tohme, Joe; Graterol, Eduardo; Cruz, Maribel; Lorieux, Mathias, 2023, "Genotypic and phenotypic data for Rice hoja blanca disease resistance QTL analysis", https://doi.org/10.23708/EERVFW, DataSuds, V1, UNF:6:0DU/A3JpDpAzWfzkjq7pXA== [fileUNF] These data can be used to search for quantitative trait loci (QTLs) for resistance to the Rice hoja blanca disease: - Genotypic matrices of single nucleotide polymorphism (SNP) data in four independent F2, F3 segregating populations of rice (Oryza sativa L.) derived from resistan...
RHB_QTL_data.tab May 24, 2023 - Genotypic and phenotypic data for Rice hoja blanca disease resistance QTL analysis Tabular Data - 167.7 KB - 106 Variables, 371 Observations - UNF:6:0DU/A3JpDpAzWfzkjq7pXA== DataMetadata Excel workbook containing 4 sheets (individual populations), plus one sheet (four populations combined). When downloading, select option "MS Excel - Original File Format".
Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation Dec 19, 2022 Cisse, Aby; Clermont-Dauphin, Cathy; Sall, Saidou Nourou; Ndir, Khadidiatou; Kane, Ndjido Ardo; Renard, Delphine; Violle, Cyrille; Barnaud, Adeline; Berthouly-Salazar, Cecile, 2022, "Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation", https://doi.org/10.23708/SVJS1T, DataSuds, V1, UNF:6:jEDyzHjdv0cMJIPXU7rROw== [fileUNF] This study was co-designed with farmers’ organizations in Senegal with the aim of assessing the impacts of the mixing of early- and late-flowering pearl millet landraces (Cenchrus americanus) on in situ yield, i.e. in poor soil conditions with limited fertilization on smallholder...

Morphometrics_date_palm_seeds_readme.txt

Sep 27, 2023 - Origins and evolution of oasis agriculture in the Sahara: morphometric measurements of archaeological and modern date palm seeds

Plain Text - 2.3 KB -

Documentation

Dataset citation and description.

Traditional_morphometric_measurements_Libyan_seeds.tab

Sep 27, 2023 - Origins and evolution of oasis agriculture in the Sahara: morphometric measurements of archaeological and modern date palm seeds

Tabular Data - 18.7 KB - 7 Variables, 312 Observations -

Data

Morphometric measurements (length, width, ...) of archeological date palm seeds from Libya. The column "Site" corresponds to the archaeological sites: "GHI" = Ghirza; "ZIN" = Zinkekra.

Traditional_morphometric_measurements_reference_collection.tab

Sep 27, 2023 - Origins and evolution of oasis agriculture in the Sahara: morphometric measurements of archaeological and modern date palm seeds

Tabular Data - 421.6 KB - 8 Variables, 6541 Observations -

Data

Morphometric measurements (length, width, ...) of seeds from 328 modern date palms

Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data

Jul 12, 2023

Kaczmarek, Thomas; Causse, Sandrine; Abdul, Suleiman Dangana; Abraham, Solomon; Achigan-Dako, Enoch G.; Adje, Charlotte; Adjebeng-Danquah, Joseph; Agyare, Richard Y.; Akanvou, Louise; Bakasso, Yacoubou; Barry, Mamadou B.; Bonsu, Samuel K.; Calatayud, Caroline; Conde, Soukeye; Couderc, Marie; Dachi, Stephen N.; Diallo, T; Diop, Baye M.; Deu, Monique; Gueye, Mame C.; Ibrahim Bio Yerima, Abdou R.; Issah, Abdul R; Kane, Ndjido Ardo; Kombiok, James M.; Ngom, Ablaye; Noyer, Jean-Louis; Olodo, Katina; Oselebe, Happiness O.; Pham, Jean-Louis; Picquet, Marie; Puozaa, Doris K.; Rivallan, Ronan; Saidou, Sani; Sekloka, Emmanuel; Tengey, Theophilus K.; Uyoh, Edak; Vancoppenolle, Sylvie; Vigouroux, Yves; Zekraoui, Leila; Leclerc, Christian; Barnaud, Adeline; Billot, Claire, 2023, "Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data", https://doi.org/10.23708/TX5DE2, DataSuds, V1, UNF:6:3fJ9FCQhz8EPtGubWUVcZA== [fileUNF]

Neglected and under-utilized species represent important genetic resources and untapped reservoirs of diversity to address global food and nutrition challenges. Characterizing the extent of their genetic diversity and making it available is of prime importance to their wider use...

FONIO_LIST_2372ID.tab

Jul 12, 2023 - Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data

Tabular Data - 166.9 KB - 7 Variables, 2372 Observations -

Data

List of the 2372 white fonio collection with passport information (country, project, geographical coordinates, year of sampling). A column indicates whether the accession was included or not in the genetic analyses. Clones are also indicated.

SSRs_DATA_FONIO_1539ID.tab

Jul 12, 2023 - Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data

Tabular Data - 294.4 KB - 20 Variables, 1539 Observations -

DataGenomics

SSRs data and passport information (including geographical coordinates) for the 1539 fonio accessions successfully genotyped.

SSRs_DATA_FONIO_README.txt

Jul 12, 2023 - Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data

Plain Text - 2.4 KB -

Documentation

Dataset summary

Genotypic and phenotypic data for Rice hoja blanca disease resistance QTL analysis

May 24, 2023

Silva, Alexander; Montoya, María Elker; Quintero, Constanza; Cuasquer, Juan; Tohme, Joe; Graterol, Eduardo; Cruz, Maribel; Lorieux, Mathias, 2023, "Genotypic and phenotypic data for Rice hoja blanca disease resistance QTL analysis", https://doi.org/10.23708/EERVFW, DataSuds, V1, UNF:6:0DU/A3JpDpAzWfzkjq7pXA== [fileUNF]

These data can be used to search for quantitative trait loci (QTLs) for resistance to the Rice hoja blanca disease: - Genotypic matrices of single nucleotide polymorphism (SNP) data in four independent F2, F3 segregating populations of rice (Oryza sativa L.) derived from resistan...

RHB_QTL_data.tab

May 24, 2023 - Genotypic and phenotypic data for Rice hoja blanca disease resistance QTL analysis

Tabular Data - 167.7 KB - 106 Variables, 371 Observations -

DataMetadata

Excel workbook containing 4 sheets (individual populations), plus one sheet (four populations combined). When downloading, select option "MS Excel - Original File Format".

Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation

Dec 19, 2022

Cisse, Aby; Clermont-Dauphin, Cathy; Sall, Saidou Nourou; Ndir, Khadidiatou; Kane, Ndjido Ardo; Renard, Delphine; Violle, Cyrille; Barnaud, Adeline; Berthouly-Salazar, Cecile, 2022, "Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation", https://doi.org/10.23708/SVJS1T, DataSuds, V1, UNF:6:jEDyzHjdv0cMJIPXU7rROw== [fileUNF]

This study was co-designed with farmers’ organizations in Senegal with the aim of assessing the impacts of the mixing of early- and late-flowering pearl millet landraces (Cenchrus americanus) on in situ yield, i.e. in poor soil conditions with limited fertilization on smallholder...

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