DYNADIV Team

The main focus of DYNADIV Team is
tounderstand how biodiversity of tropical plants is shaped through evolutionary forces resulting from human and environmental impacts.

Its activity is essentially based on population genetics but also integrates a multidisciplinary approach including ecology, botany, molecular phylogenetics and anthropology. It is structured around three axes:

Evolutionary history & domestication;
Diversity & conservation;
Global changes, diversity & adaptation.

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131 to 138 of 138 Results

africanRice_nrctgs_readme.txt Jan 27, 2023 - Supporting data and code for the African Rice Panreference produced by the frangiPANe software Plain Text - 1.8 KB - MD5: 73de2fe097cfc2f4e5d5495f4dd1d765 Documentation Dataset citation, description and contents summary
frangiPANe-code-v1.zip Jan 27, 2023 - Supporting data and code for the African Rice Panreference produced by the frangiPANe software ZIP Archive - 1.6 MB - MD5: e1e2f64eaf0d3b9aa16dd6b745fde5ff Code frangiPANe source code, v1 (26-01-2023) - Jupyter Notebook application
DIVAGRO_Grain_fodder_yield_perlandrace_perunit.tab Dec 19, 2022 - Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation Tabular Data - 6.1 KB - 1 Variables, 120 Observations - UNF:6:kVJeBx2o7n2Ivo2oIfE5nw== Data Grain yield and fodder yield for each landrace per repetition
DIVAGRO_Readme_data.doc Dec 19, 2022 - Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation MS Word - 41.0 KB - MD5: 8efb35ecca0388047b19c2aaebcec343 Documentation
DIVAGRO_soil_measures.tab Dec 19, 2022 - Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation Tabular Data - 1.4 KB - 1 Variables, 30 Observations - UNF:6:934e90kSsr/w67IBQ4eeFg== Data Soil measures for the two villages: NO3,NH4,N,C,C/N,P and pH
DIVAGRO_traits_perlandrace_perunit.tab Dec 19, 2022 - Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation Tabular Data - 32.9 KB - 1 Variables, 225 Observations - UNF:6:lGEnoGrgCkL1cTX9nVuCSA== Data 14 traits measured for each landrace per repetition
africanRice_nrctgs_V1.fasta Oct 26, 2022 - Supporting data and code for the African Rice Panreference produced by the frangiPANe software Unknown - 504.0 MB - MD5: 9d5d44f42a84c20758347c6b96246c01 Data Fasta file of the new sequences absent from the reference
africanRice_nrctgs_V1_placedOnGenome.tab Oct 26, 2022 - Supporting data and code for the African Rice Panreference produced by the frangiPANe software Tabular Data - 4.6 MB - 4 Variables, 152411 Observations - UNF:6:J8wm0efC8Lf7KQQ/txrx4Q== Data CSV file with the position of the new sequences on the genome reference. It contains one line per sequence, each containing 4 columns : (1) the sequence id, (2) its length (bp), (3) the chromosome name, (4) its position on the chromosome.

africanRice_nrctgs_readme.txt

Jan 27, 2023 - Supporting data and code for the African Rice Panreference produced by the frangiPANe software

Plain Text - 1.8 KB -

Documentation

Dataset citation, description and contents summary

frangiPANe-code-v1.zip

Jan 27, 2023 - Supporting data and code for the African Rice Panreference produced by the frangiPANe software

ZIP Archive - 1.6 MB -

Code

frangiPANe source code, v1 (26-01-2023) - Jupyter Notebook application

DIVAGRO_Grain_fodder_yield_perlandrace_perunit.tab

Dec 19, 2022 - Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation

Tabular Data - 6.1 KB - 1 Variables, 120 Observations -

Data

Grain yield and fodder yield for each landrace per repetition

DIVAGRO_Readme_data.doc

Dec 19, 2022 - Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation

MS Word - 41.0 KB -

Documentation

DIVAGRO_soil_measures.tab

Dec 19, 2022 - Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation

Tabular Data - 1.4 KB - 1 Variables, 30 Observations -

Data

Soil measures for the two villages: NO3,NH4,N,C,C/N,P and pH

DIVAGRO_traits_perlandrace_perunit.tab

Dec 19, 2022 - Data for: Varietal mixtures of Sahelian smallholders conciliate enhanced yield and agrobiodiversity conservation

Tabular Data - 32.9 KB - 1 Variables, 225 Observations -

Data

14 traits measured for each landrace per repetition

africanRice_nrctgs_V1.fasta

Oct 26, 2022 - Supporting data and code for the African Rice Panreference produced by the frangiPANe software

Unknown - 504.0 MB -

Data

Fasta file of the new sequences absent from the reference

africanRice_nrctgs_V1_placedOnGenome.tab

Oct 26, 2022 - Supporting data and code for the African Rice Panreference produced by the frangiPANe software

Tabular Data - 4.6 MB - 4 Variables, 152411 Observations -

Data

CSV file with the position of the new sequences on the genome reference. It contains one line per sequence, each containing 4 columns : (1) the sequence id, (2) its length (bp), (3) the chromosome name, (4) its position on the chromosome.

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