UMR DIADE

DIversity - Adaptation - plant DEvelopment

The DIADE Research Unit aims to understand the diversification of tropical plants, one of the main original reservoirs of biodiversity, and for which conservation, management and exploitation are an important issue for Sustainable Development.

The nine teams forming the Unit belong to IRD, University of Montpellier, CIRAD, and CNRS.

CERES Team

DYNADIV Team

PANEEC Team

EVOGEC Team

ADvENS Team

AgroLD

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1 to 10 of 54 Results

Savanache front-end Sep 29, 2026 - Savanache Mohamed, Mourdas, 2026, "Savanache front-end", https://doi.org/10.23708/TIOUJO, DataSuds, V1 This dataverse contains the Savanache front-end code
Savanache backend Sep 29, 2026 - Savanache Mohamed, Mourdas, 2026, "Savanache backend", https://doi.org/10.23708/INDK3I, DataSuds, V1 This dataverse contains the source code for Savanache back-end publication
Savanache API Sep 29, 2026 - Savanache Mohamed, Mourdas, 2026, "Savanache API", https://doi.org/10.23708/VBJD0V, DataSuds, V1 This dataverse contains the current code for Savanache API 0.7.0, corresponding with the 1.0.1 main Savanache version
Savanache main Sep 29, 2026 - Savanache Mohamed, Mourdas, 2026, "Savanache main", https://doi.org/10.23708/KWUCXH, DataSuds, V1 This is the main repo code for Savanache, v1.0.1
Simulated data for GranPa v1 paper Aug 26, 2026 - GraNPA Simulated data Carrette, Camille, 2026, "Simulated data for GranPa v1 paper", https://doi.org/10.23708/PGUHS8, DataSuds, V1 This dataset contains all the simulated data (insertion, deletion, original sequences) and graphs for the GranPa v1 paper
rice data Aug 26, 2026 - GraNPA true data Carrette, Camille; Muller, Cédric, 2026, "rice data", https://doi.org/10.23708/M2U8UV, DataSuds, V2, UNF:6:lyR0AOqrO7l0IQSern+OYg== [fileUNF] This dataset cointains all the output from GraNPA original paper for rice
cattle data Jul 31, 2026 - GraNPA true data Carrette, Camille, 2026, "cattle data", https://doi.org/10.23708/2G2DFB, DataSuds, V1 Cattle Pangenome variation graph data used in the GranPA paper
Supplementary command lines for the GraNPA paper Jul 30, 2026 - GraNPA other codes used for the manuscript Carrette, Camille; Muller, Cédric, 2026, "Supplementary command lines for the GraNPA paper", https://doi.org/10.23708/AU5ALD, DataSuds, V1 This file contains all the commands used for generate data and results in the GranPA paper
GranPa source code, v1 Jul 30, 2026 - GranPa Source Code Carrette, Camille; Muller, Cédric, 2026, "GranPa source code, v1", https://doi.org/10.23708/JG96WP, DataSuds, V1 This code is the version used in the GranPa paper
SAGHAS - Sowing AGrobiodiversity to HArvest Sustainability: a multi-source database of crop species cultivated for human food Jul 9, 2026 - DYNADIV Team Davy, Martin; Barnaud, Adeline; Berthouly-Salazar, Cecile; Renard Delphine; Thuillet, Anne-Celine, 2026, "SAGHAS - Sowing AGrobiodiversity to HArvest Sustainability: a multi-source database of crop species cultivated for human food", https://doi.org/10.23708/LK5VUI, DataSuds, V1, UNF:6:mNCUB06Fnpj7NbK+SblAGA== [fileUNF] Across the vast diversity of vascular plants on Earth, around 6,000 species have been used as food sources for humans. Yet, only nine crops provide more than 60% of the calories consumed worldwide. In the face of accelerating climate change, biodiversity loss, and malnutrition, t...

Savanache front-end

Sep 29, 2026 - Savanache

Mohamed, Mourdas, 2026, "Savanache front-end", https://doi.org/10.23708/TIOUJO, DataSuds, V1

This dataverse contains the Savanache front-end code

Savanache backend

Sep 29, 2026 - Savanache

Mohamed, Mourdas, 2026, "Savanache backend", https://doi.org/10.23708/INDK3I, DataSuds, V1

This dataverse contains the source code for Savanache back-end publication

Savanache API

Sep 29, 2026 - Savanache

Mohamed, Mourdas, 2026, "Savanache API", https://doi.org/10.23708/VBJD0V, DataSuds, V1

This dataverse contains the current code for Savanache API 0.7.0, corresponding with the 1.0.1 main Savanache version

Savanache main

Sep 29, 2026 - Savanache

Mohamed, Mourdas, 2026, "Savanache main", https://doi.org/10.23708/KWUCXH, DataSuds, V1

This is the main repo code for Savanache, v1.0.1

Simulated data for GranPa v1 paper

Aug 26, 2026 - GraNPA Simulated data

Carrette, Camille, 2026, "Simulated data for GranPa v1 paper", https://doi.org/10.23708/PGUHS8, DataSuds, V1

This dataset contains all the simulated data (insertion, deletion, original sequences) and graphs for the GranPa v1 paper

rice data

Aug 26, 2026 - GraNPA true data

Carrette, Camille; Muller, Cédric, 2026, "rice data", https://doi.org/10.23708/M2U8UV, DataSuds, V2, UNF:6:lyR0AOqrO7l0IQSern+OYg== [fileUNF]

This dataset cointains all the output from GraNPA original paper for rice

cattle data

Jul 31, 2026 - GraNPA true data

Carrette, Camille, 2026, "cattle data", https://doi.org/10.23708/2G2DFB, DataSuds, V1

Cattle Pangenome variation graph data used in the GranPA paper

Supplementary command lines for the GraNPA paper

Jul 30, 2026 - GraNPA other codes used for the manuscript

Carrette, Camille; Muller, Cédric, 2026, "Supplementary command lines for the GraNPA paper", https://doi.org/10.23708/AU5ALD, DataSuds, V1

This file contains all the commands used for generate data and results in the GranPA paper

GranPa source code, v1

Jul 30, 2026 - GranPa Source Code

Carrette, Camille; Muller, Cédric, 2026, "GranPa source code, v1", https://doi.org/10.23708/JG96WP, DataSuds, V1

This code is the version used in the GranPa paper

SAGHAS - Sowing AGrobiodiversity to HArvest Sustainability: a multi-source database of crop species cultivated for human food

Jul 9, 2026 - DYNADIV Team

Davy, Martin; Barnaud, Adeline; Berthouly-Salazar, Cecile; Renard Delphine; Thuillet, Anne-Celine, 2026, "SAGHAS - Sowing AGrobiodiversity to HArvest Sustainability: a multi-source database of crop species cultivated for human food", https://doi.org/10.23708/LK5VUI, DataSuds, V1, UNF:6:mNCUB06Fnpj7NbK+SblAGA== [fileUNF]

Across the vast diversity of vascular plants on Earth, around 6,000 species have been used as food sources for humans. Yet, only nine crops provide more than 60% of the calories consumed worldwide. In the face of accelerating climate change, biodiversity loss, and malnutrition, t...

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