1 to 10 of 34 Results
Sabot, Francois; Marthe, Nina; Zytnicki, Matthias, 2025, "GrAnnoT source code and scripts", https://doi.org/10.23708/TW3KYV, DataSuds, V2
GrAnnoT is an annotation transfer tool for pangenome graph. The source code at the time of the paper submission is available in this dataset. The git repository is available at : https://forge.ird.fr/diade/dynadiv/grannot/-/tree/main |
Mar 20, 2025 - GrAnnoT data and output
Marthe, Nina; Sabot, Francois, 2025, "Output from the analysis described in GrAnnoT paper", https://doi.org/10.23708/RRSKRA, DataSuds, V5
GrAnnoT is an annotation transfer tool for pangenome graph. It was tested and compared to other approaches, and the outputs from these tests are available in this dataset. It includes mainly transferred annotations. |
Mar 20, 2025 - GrAnnoT data and output
Marthe, Nina; Sabot, Francois, 2025, "Data used for the analysis described in GrAnnoT paper", https://doi.org/10.23708/DO1RTF, DataSuds, V5
GrAnnoT is an annotation transfer tool for pangenome graph. It was tested and compared to other approaches, and the data necessary for these tests is available in this dataset. It includes mainly pangenome graphs, genomes, and annotations. |
Feb 24, 2025 - DateBack
Besseiche, Margot; Sabot, Francois; Gros-Balthazard, Muriel, 2025, "Source code for DateBack", https://doi.org/10.23708/KNQIN1, DataSuds, V2
Source code for the DatePalm website https://XXXXXXX |
Feb 20, 2025 - DateBack
Besseiche, Margot; Gros-Balthazard, Muriel; Chambraud, Elora Thanh; Dabrowski, Vladimir; Brandstätt, Elisa; Bouchaud, Charlène, 2025, "Radiocarbon data table for date palm remains for Dateback", https://doi.org/10.23708/C5N9CM, DataSuds, V1
This table documents radiocarbon analyses of date palm remains from Date Back, linking each analysis to its site and context from the Main Table. It includes specific fields such as laboratory codes, anatomical parts, preservation states, raw 14C ages (with uncertainty), and cali... |
Vadez, Vincent; Bossuet, Jérome; Chehbouni, Abdelghani; Kharrou, Mohamed (hakim); Jacob, Frederic; Mekki, Insaf; Zitouna Chebbi, Rim; Belhouchette, Hatem; Hassenforder, Emeline; Faysse, Nicolas; Hajjarpoor, Amir; Rebolledo, Maria Camila; Cohard, Jean-Martial; Vandervaere, Jean-Pierre; Dolinska, Aleksandra; Sultan, Benjamin, 2021, "France-CGIAR BRIDGE collaboration: integrated model-based approaches for climate and water smart decisions", https://doi.org/10.23708/IY0MZY, DataSuds, V4, UNF:6:r1Sk6vJDiM0/k0efcWB/bQ== [fileUNF]
Under the new oneCGIAR 2030 strategy, the CGIAR has been undertaking an integrated land-food-water systems research transformation, to deploy sustainable agricultural innovations at a faster rate for smallholder agriculture in the developing countries. France has been supporting... |
Nakombo-Gbassault, Princia; Arenas, Sebastian; Affortit, Pablo; Faye, Awa; Flis, Paulina; Sine, Bassirou; Moukouanga, Daniel; Kane, Ndjido Ardo; Bennett, Malcolm; Wells, Darren; Cubry, Philippe; Bailey, Liz; Grondin, Alexandre; Vigouroux, Yves; Laplaze, Laurent, 2025, "Leaf ion content in pearl millet (Senegal, 2021-2022)", https://doi.org/10.23708/DWGEAJ, DataSuds, V1, UNF:6:eg+VmV/nauULROuvgkx5Ig== [fileUNF]
Pearl millet (Pennisetum glaucum) is a nutrient-rich cereal crop cultivated in arid and semi-arid regions, particularly in sub-Saharan Africa, where it serves as a vital source of grain and fodder for millions of smallholder farmers. This crop is known to produce in hot, dry clim... |
Grondin, Alexandre; Arenas, Sebastian; Djabali, Yacine; Rincent, Renaud; Cubry, Philippe; Martin, Marie-Laure; Blein-Nicolas, Mélisande; Laplaze, Laurent; Schneider, Hannah, 2025, "Modeling plant phenotypic plasticity and its underlying genetic architecture (France, 2022-2025)", https://doi.org/10.23708/O64HQY, DataSuds, V1, UNF:6:GqRZeZVaQq+yHEkPq3ah+w== [fileUNF]
Phenotypic plasticity can contribute to crop adaptation to challenging environments. Plasticity indices are potentially useful to identify the genetic basis of crop phenotypic plasticity. Numerous methods exist to measure phenotypic plasticity. Among those, the ratio (also called... |
Sep 30, 2024 - CERES Team
Grondin, Alexandre; Tran, Hien Linh; Hoang, Giang Thi; Gantet, Pascal, 2024, "Grain ionomic in Vietnamese rice landraces (2019-2024)", https://doi.org/10.23708/A76RP9, DataSuds, V1, UNF:6:9e39AEthrB4VQqWHkzzsgQ== [fileUNF]
Rice (Oryza sativa L.) is a staple food for half of the world’s population and its biofortification is a key factor in fighting micronutrient malnutrition. However, harmful heavy metals tend to accumulate in rice grains due to soil and water contamination. Therefore, it is import... |
Adji, Beda-Innocent; Chakocha Ngandjui, Armel Franklin; Guibien Cléophas Zerbo; Marie Louise Avana Tientcheu; Hardy, Olivier; Mariac, Cédric; Duminil, Jérôme, 2024, "Data on the Genetic Diversity Study of the African Olive (Canarium schweinfurthii, Burseraceae) in Africa for Climate Change Adaptation", https://doi.org/10.23708/GWRGBC, DataSuds, V1, UNF:6:j8ybPdLmWqOvh7eHYFEd2A== [fileUNF]
In Africa, the decline of numerous tree species due to rapid population growth, deforestation, and climate change is a major concern. Several native multi-purpose agroforestry species are at risk of losing genetic diversity, which may lead to their extinction. This is the case fo... |
