DIversity - Adaptation - plant DEvelopment

The DIADE Research Unit aims to understand the diversification of tropical plants, one of the main original reservoirs of biodiversity, and for which conservation, management and exploitation are an important issue for Sustainable Development.

The nine teams forming the Unit belong to IRD, University of Montpellier, CIRAD, and CNRS.
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291 to 300 of 1,002 Results
RUN_boxcox_transformation.r
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
R Syntax - 15.9 KB - MD5: 2197d4e493f646297ed03db3e371a516
Code
R script used to transform BLUEs and residues in order to achieve normality
RUN_fisher_combining.R
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
R Syntax - 18.8 KB - MD5: 97c87ba6aa07de5baf01177be72fcb22
Code
R script used to perform the Fisher combining analysis
RUN_GWAS_ionomil.R
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
R Syntax - 10.4 KB - MD5: 18a3cee3c24956d4bd8fc0ce8f97d939
Code
R script used to perform the association analyses
RUN_linear_regression.r
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
R Syntax - 3.4 KB - MD5: edde31ddcad90b96aaf8d6dda72103c8
Code
R script used to calculate the residues
RUN_Manhattan_plots.R
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
R Syntax - 15.9 KB - MD5: 5afad459c14f98f4ee48646df79ded40
Code
R script used to perform the Manhattan plots
Soil_Data_IonoMil.tab
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
Tabular Data - 41.0 KB - 23 Variables, 206 Observations - UNF:6:aQhYLUxEvS8gzYHzKlaUXg==
Data
Ion content in the soil
Table_sig_snp.tab
Jan 30, 2025 - Leaf ion content in pearl millet (Senegal, 2021-2022)
Tabular Data - 12.7 KB - 8 Variables, 161 Observations - UNF:6:UyVPQ9FB7/NPKtyfMw02eA==
Data
Table containing the 161 significant SNP identified
0_Plasticity_Data_Dictionary.tab
Jan 16, 2025 - Modeling plant phenotypic plasticity and its underlying genetic architecture (France, 2022-2025)
Tabular Data - 8.4 KB - 3 Variables, 56 Observations - UNF:6:GqRZeZVaQq+yHEkPq3ah+w==
Documentation
Data dictionary
0_ReadMe.txt
Jan 16, 2025 - Modeling plant phenotypic plasticity and its underlying genetic architecture (France, 2022-2025)
Plain Text - 3.4 KB - MD5: 6d07adff7673d9c7bb59d1cff490d072
Documentation
Dataset citation, description and terms of use
0_References_Plasticity_Dataset.pdf
0_References_Plasticity_Dataset.pdf
Jan 16, 2025 - Modeling plant phenotypic plasticity and its underlying genetic architecture (France, 2022-2025)
Adobe PDF - 30.4 KB - MD5: c96c4f3e8c86a57e68909d52df92dcb7
Documentation
References - cited sources
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