UMR DIADE

DIversity - Adaptation - plant DEvelopment

The DIADE Research Unit aims to understand the diversification of tropical plants, one of the main original reservoirs of biodiversity, and for which conservation, management and exploitation are an important issue for Sustainable Development.

The nine teams forming the Unit belong to IRD, University of Montpellier, CIRAD, and CNRS.

CERES Team

DYNADIV Team

PANEEC Team

EVOGEC Team

ADvENS Team

AgroLD

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381 to 390 of 1,043 Results

ReadMe.txt Apr 29, 2024 - Called genotypes (chromosome 1) from Illumina whole-genome sequencing of an Indica x Japonica rice F2 population Plain Text - 1.0 KB - MD5: 91fe283277eff5f80f7fb8e3703d8c40 Documentation ReadMe file - data citation, description and terms of use.
Supplementary data for: Ethnolinguistic and genetic diversity of fonio (Digitaria exilis - Kippist - Stapf) in Senegal Dec 6, 2023 - DYNADIV Team Diop, Baye Magatte; Barnaud, Adeline; Billot, Claire; Guèye, Mame Codou, 2023, "Supplementary data for: Ethnolinguistic and genetic diversity of fonio (Digitaria exilis - Kippist - Stapf) in Senegal", https://doi.org/10.23708/5WDKS1, DataSuds, V1, UNF:6:NeauNrptcRyq6NeGtIhJqg== [fileUNF] This data on fonio highlighted that social factors are pivotal in structuring diversity and should be taken into greater consideration in research and conservation projects to dovetail local and regional scales. It also showed that neglected species such as fonio - which are seld...
Fonio_Genotype_Senegal_2013_2015.tab Dec 6, 2023 - Supplementary data for: Ethnolinguistic and genetic diversity of fonio (Digitaria exilis - Kippist - Stapf) in Senegal Tabular Data - 26.1 KB - 20 Variables, 158 Observations - UNF:6:NeauNrptcRyq6NeGtIhJqg== Data This dataset is the most comprehensive collection on fonio in Senegal. It includes the individuals, regions, villages, ethnic groups of the farmers interviewed, their linguistic group, the cycle of fonio accessions reported by the farmers and SSR data.
Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions Nov 29, 2023 - DYNADIV Team Millet, Claude Patrick; Allinne, Clémentine; Vi, Tram; Marraccini, Pierre; Verleysen, Lauren; Couderc, Marie; Ruttink, Tom; Zhang, Dapeng; Solano Sánchez, William; Christine, Tranchant-Dubreuil; Jeune, Wesly; Poncet, Valérie, 2023, "Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions", https://doi.org/10.23708/T6YZML, DataSuds, V1, UNF:6:4wzzOYlt0nsxd5jgI0e5Eg== [fileUNF] Though facing significant challenges, Coffee (Coffea arabica) grown in Haitian agroforestry systems are important contributors to rural livelihoods and provide several ecosystem services. There has been little work done on their genetic diversity and the variety mixtures used, an...
Millet23_coffee_0_Readme.pdf Nov 29, 2023 - Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions Adobe PDF - 84.6 KB - MD5: 68c9886481656da24e8f4044b5d68a76 Documentation Data documentation
Millet23_coffee_1_references_info.tab Nov 29, 2023 - Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions Tabular Data - 9.9 KB - 8 Variables, 128 Observations - UNF:6:cnk88qwuB9aou3ACaJVW5A== Data This file contains information about the various Coffea reference samples from international collections used in the study
Millet23_coffee_2_field_sample_info.tab Nov 29, 2023 - Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions Tabular Data - 60.5 KB - 10 Variables, 610 Observations - UNF:6:RxSTcnFSQOxeLTRcDf4VVw== DataGeospatial This file contains information about the Coffee field samples collected in Haiti
Millet23_coffee_3_kasp_genotypes.tab Nov 29, 2023 - Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions Tabular Data - 408.1 KB - 93 Variables, 733 Observations - UNF:6:v6l2QsJcVY795JaocXLe+Q== Data This file contains the data from KASP targeted genotyping (87 loci)
Millet23_coffee_4_hiplex_haplotypes.tab Nov 29, 2023 - Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions Tabular Data - 2.2 MB - 725 Variables, 771 Observations - UNF:6:6R27Yo4iGEvbuknJjRX4FQ== Data This file contains the Haplotype data obtained from HiPlex multiplex amplicon sequencing
Millet23_coffee_alldatasets.xlsx Nov 29, 2023 - Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions MS Excel Spreadsheet - 1.9 MB - MD5: 2373559d3f310e747529fb876755bbb3 Data This file combines all data tables in Excel (.xlsx) format

ReadMe.txt

Apr 29, 2024 - Called genotypes (chromosome 1) from Illumina whole-genome sequencing of an Indica x Japonica rice F2 population

Plain Text - 1.0 KB -

Documentation

ReadMe file - data citation, description and terms of use.

Supplementary data for: Ethnolinguistic and genetic diversity of fonio (Digitaria exilis - Kippist - Stapf) in Senegal

Dec 6, 2023 - DYNADIV Team

Diop, Baye Magatte; Barnaud, Adeline; Billot, Claire; Guèye, Mame Codou, 2023, "Supplementary data for: Ethnolinguistic and genetic diversity of fonio (Digitaria exilis - Kippist - Stapf) in Senegal", https://doi.org/10.23708/5WDKS1, DataSuds, V1, UNF:6:NeauNrptcRyq6NeGtIhJqg== [fileUNF]

This data on fonio highlighted that social factors are pivotal in structuring diversity and should be taken into greater consideration in research and conservation projects to dovetail local and regional scales. It also showed that neglected species such as fonio - which are seld...

Fonio_Genotype_Senegal_2013_2015.tab

Dec 6, 2023 - Supplementary data for: Ethnolinguistic and genetic diversity of fonio (Digitaria exilis - Kippist - Stapf) in Senegal

Tabular Data - 26.1 KB - 20 Variables, 158 Observations -

Data

This dataset is the most comprehensive collection on fonio in Senegal. It includes the individuals, regions, villages, ethnic groups of the farmers interviewed, their linguistic group, the cycle of fonio accessions reported by the farmers and SSR data.

Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions

Nov 29, 2023 - DYNADIV Team

Millet, Claude Patrick; Allinne, Clémentine; Vi, Tram; Marraccini, Pierre; Verleysen, Lauren; Couderc, Marie; Ruttink, Tom; Zhang, Dapeng; Solano Sánchez, William; Christine, Tranchant-Dubreuil; Jeune, Wesly; Poncet, Valérie, 2023, "Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions", https://doi.org/10.23708/T6YZML, DataSuds, V1, UNF:6:4wzzOYlt0nsxd5jgI0e5Eg== [fileUNF]

Though facing significant challenges, Coffee (Coffea arabica) grown in Haitian agroforestry systems are important contributors to rural livelihoods and provide several ecosystem services. There has been little work done on their genetic diversity and the variety mixtures used, an...

Millet23_coffee_0_Readme.pdf

Nov 29, 2023 - Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions

Adobe PDF - 84.6 KB -

Documentation

Data documentation

Millet23_coffee_1_references_info.tab

Nov 29, 2023 - Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions

Tabular Data - 9.9 KB - 8 Variables, 128 Observations -

Data

This file contains information about the various Coffea reference samples from international collections used in the study

Millet23_coffee_2_field_sample_info.tab

Nov 29, 2023 - Genotyping data for field samples from Haitian coffee agroforestry systems and international collection accessions