DIversity - Adaptation - plant DEvelopment

The DIADE Research Unit aims to understand the diversification of tropical plants, one of the main original reservoirs of biodiversity, and for which conservation, management and exploitation are an important issue for Sustainable Development.

The nine teams forming the Unit belong to IRD, University of Montpellier, CIRAD, and CNRS.
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401 to 410 of 1,043 Results
FONIO_LIST_2372ID.tab
Jul 12, 2023 - Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data
Tabular Data - 166.9 KB - 7 Variables, 2372 Observations - UNF:6:EA1GdWbKlAxvARCWP3v3wg==
Data
List of the 2372 white fonio collection with passport information (country, project, geographical coordinates, year of sampling). A column indicates whether the accession was included or not in the genetic analyses. Clones are also indicated.
SSRs_DATA_FONIO_1539ID.tab
Jul 12, 2023 - Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data
Tabular Data - 294.4 KB - 20 Variables, 1539 Observations - UNF:6:nqX4D5T4z/xl5aC5ZR319A==
DataGenomics
SSRs data and passport information (including geographical coordinates) for the 1539 fonio accessions successfully genotyped.
SSRs_DATA_FONIO_README.txt
Jul 12, 2023 - Genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions in West Africa: SSRs data
Plain Text - 2.4 KB - MD5: 9e6891c5735fcc1df88d462203fa664d
Documentation
Dataset summary
Genotypic and phenotypic data for Rice hoja blanca disease resistance QTL analysis
Genotypic and phenotypic data for Rice hoja blanca disease resistance QTL analysis
May 24, 2023 - DYNADIV Team
Silva, Alexander; Montoya, María Elker; Quintero, Constanza; Cuasquer, Juan; Tohme, Joe; Graterol, Eduardo; Cruz, Maribel; Lorieux, Mathias, 2023, "Genotypic and phenotypic data for Rice hoja blanca disease resistance QTL analysis", https://doi.org/10.23708/EERVFW, DataSuds, V1, UNF:6:0DU/A3JpDpAzWfzkjq7pXA== [fileUNF]
These data can be used to search for quantitative trait loci (QTLs) for resistance to the Rice hoja blanca disease: - Genotypic matrices of single nucleotide polymorphism (SNP) data in four independent F2, F3 segregating populations of rice (Oryza sativa L.) derived from resistan...
RHB_QTL_data.tab
May 24, 2023 - Genotypic and phenotypic data for Rice hoja blanca disease resistance QTL analysis
Tabular Data - 167.7 KB - 106 Variables, 371 Observations - UNF:6:0DU/A3JpDpAzWfzkjq7pXA==
DataMetadata
Excel workbook containing 4 sheets (individual populations), plus one sheet (four populations combined). When downloading, select option "MS Excel - Original File Format".
Caiapo genome
Apr 21, 2023 - OryzaGenomeData
SABOT, Francois, 2023, "Caiapo genome", https://doi.org/10.23708/QMM2WH, DataSuds, V1
This data are the draft genome assembly of Caiapo and its annotation transferred from IRGSP1.0/Nipponbare reference genome. Caiapo is a Oryza sativa variety involved in some CSSL crosses (2023-04-21)
AnnotRAPdb-Caiapo_FlyeMedakaRagtag.gff3
Apr 21, 2023 - Caiapo genome
text/gff3 - 111.5 MB - MD5: fd0b2cd31c233d812a6f5df72b895170
Caiapo_FlyeMedakaRagtag.fasta
Apr 21, 2023 - Caiapo genome
Unknown - 362.9 MB - MD5: 7daae958c8cd6a397a7bac33ff976867
MG12 data
Apr 21, 2023 - OryzaGenomeData
SABOT, Francois, 2023, "MG12 data", https://doi.org/10.23708/1JST4X, DataSuds, V1
This data are the draft genome assembly of MG12 ans its annotation transfered from IRGSP1.0/Nipponbare ference genome. MG12 is a Oryza glaberrima variety involved in some CSSL crosses
AnnotOg132Mg12PrFinal.gff3
Apr 21, 2023 - MG12 data
text/gff3 - 11.2 MB - MD5: 62ccdc3eda6213e40aae00a6331e3232
Annotation transferred from RapDB
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