DIversity - Adaptation - plant DEvelopment

The DIADE Research Unit aims to understand the diversification of tropical plants, one of the main original reservoirs of biodiversity, and for which conservation, management and exploitation are an important issue for Sustainable Development.

The nine teams forming the Unit belong to IRD, University of Montpellier, CIRAD, and CNRS.
Featured Dataverses

In order to use this feature you must have at least one published or linked dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

Advanced Search

451 to 460 of 1,043 Results
Quercus_ilex_Tunisia_Info_legend.tab
Sep 22, 2022 - Replication Data for Distribution of Quercus ilex subsp. rotundifolia in Tunisia and intraspecific variation of seed morphophysiological traits along climatic gradients
Tabular Data - 4.1 KB - 4 Variables, 57 Observations - UNF:6:zDhm9+7gJOY1s3qihtdE4g==
Documentation
Description of the variables used
Quercus_ilex_Tunisia_Measured_data.tab
Sep 22, 2022 - Replication Data for Distribution of Quercus ilex subsp. rotundifolia in Tunisia and intraspecific variation of seed morphophysiological traits along climatic gradients
Tabular Data - 8.7 KB - 57 Variables, 18 Observations - UNF:6:I8n0JHgQrbagPQ/J0DWPJw==
DataGeospatial
Locations of the 18 source populations for Quercus ilex in Northern Tunisia, and their main associated climate characteristics, as well as variation in morphological and physiological traits of seeds and acorns among the 18 Tunisian Holm oak populations studied
Quercus_ilex_Tunisia_Quercus_ilex_coordinates.tab
Sep 22, 2022 - Replication Data for Distribution of Quercus ilex subsp. rotundifolia in Tunisia and intraspecific variation of seed morphophysiological traits along climatic gradients
Tabular Data - 38.4 KB - 8 Variables, 276 Observations - UNF:6:f5I6b7NXtJQ9UamqOw9VPQ==
DataGeospatial
Geographical coordinates, elevation of Quercus ilex subsp. rotundifolia distribution sites in Tunisia
ADvENS Team(UMR DIADE)
ADvENS Team logo
Sep 9, 2022
ADvENS Team The ADvENS team performs integrative analyses of the diversity and environmental adaptation of tropical and Mediterranean trees. In particular, the team aims to better understand the evolution of genomes, transcriptomes and metabolisms associated with local adaptation...
Source code of CulebrONT: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
Source code of CulebrONT: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
Aug 18, 2022
Orjuela, Julie; Comte, Aurore; Ravel, Sébastien; Charriat, Florian; Vi, Tram; Sabot, François; Cunnac, Sébastien, 2022, "Source code of CulebrONT: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes", https://doi.org/10.23708/TBPNWJ, DataSuds, V3
CulebrONT is an open-source, scalable, modulable and traceable snakemake pipeline, able to launch multiple assembly tools in parallel and providing help for choosing the best possible assembly. Documentation: https://culebront-pipeline.readthedocs.io/en/2.1.1/ Code development: h...
culebrONT-2.1.1.tar.gz
Aug 18, 2022 - Source code of CulebrONT: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
Gzip Archive - 829.1 KB - MD5: c9d6c534f6cbdcb0de33a79b1a1a51c0
Code
Source code of culebrONT pipeline stable version 2.1.1
Test data, reports and documentation for CulebrONT software: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
Test data, reports and documentation for CulebrONT software: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
Aug 18, 2022
Orjuela, Julie; Comte, Aurore; Ravel, Sébastien; Charriat, Florian; Vi, Tram; Sabot, Francois; Cunnac, Sébastien, 2022, "Test data, reports and documentation for CulebrONT software: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes", https://doi.org/10.23708/RJDLCN, DataSuds, V1
Related to CulebrONT software, this dataset includes: - data used to test the software - 2 reports generated by the software : from the test data and from other data - supplementary technical information about CulebrONT pipeline
CulebrONT_Data-Xoo-sub.zip
Aug 18, 2022 - Test data, reports and documentation for CulebrONT software: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
ZIP Archive - 314.2 MB - MD5: c1d4d4fb38546ad3e07c34c25203ab73
Data
Dataset used to test CulebrONT code
CulebrONT_PCJ_supplemental.pdf
CulebrONT_PCJ_supplemental.pdf
Aug 18, 2022 - Test data, reports and documentation for CulebrONT software: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
Adobe PDF - 1.1 MB - MD5: 491db3bc9c1d44f16d9eb0a4ce2f4c43
Documentation
Supplementary information related to CulebrONT pipeline implementation
CulebrONT_REPORT_Data-Xoo-sub.zip
Aug 18, 2022 - Test data, reports and documentation for CulebrONT software: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
ZIP Archive - 27.0 MB - MD5: 063d9231f2ccd8e571191ab2c2ef503d
DataDocumentation
Final report generated by CulebrONT software using the test dataset Data-Xoo-sub.zip
Add Data

Log in to create a dataverse or add a dataset.

Log In
Share Dataverse

Share this dataverse on your favorite social media networks.

Link Dataverse
Reset Modifications

Are you sure you want to reset the selected metadata fields? If you do this, any customizations (hidden, required, optional) you have done will no longer appear.