UMR DIADE

DIversity - Adaptation - plant DEvelopment

The DIADE Research Unit aims to understand the diversification of tropical plants, one of the main original reservoirs of biodiversity, and for which conservation, management and exploitation are an important issue for Sustainable Development.

The nine teams forming the Unit belong to IRD, University of Montpellier, CIRAD, and CNRS.

CERES Team

DYNADIV Team

EVOGEC Team

ADvENS Team

AgroLD

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41 to 50 of 962 Results

liftoff_transfer_chm13_to_grch38.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 160.9 MB - MD5: a944747959786332e338b42bce913de8 Data Result of the human Chr1 annotation transfer by Liftoff
liftoff_transfer_k12_to_0127.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 2.8 MB - MD5: 298cbbbb13e32aa780e4b050362676a6 Data Result of the E.coli annotation transfer by Liftoff.
O127_H6_E2348_69_193637c.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 2.1 MB - MD5: 84c6d4c05dcb1847bf2793919dfea9df Data Result of the E.coli annotation transfer by GrAnnoT.
odgi_transfer_nb_azu.bed Mar 10, 2025 - Output from the analysis described in GrAnnoT paper PLINK Binary - 187.8 MB - MD5: 8070e80fde5899d58b0ec16189b488a8 Data Result of the ODGI transfer between Nipponbare and AzucenaRS1 through the pangenome graph.
Os117425RS1.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 113.3 MB - MD5: 76e7db440455ca21bed9758664eb69f5 Data Result of GrAnnoT annotation transfer from Nipponbare (IRGSP).
Os117425RS1_named.db.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 115.4 MB - MD5: 447841c462c35690f4ad0dbcfab1d908 Data Result of Liftoff annotation transfer from Nipponbare (IRGSP), in database mode.
Os117425RS1_named.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 115.4 MB - MD5: 2d91cee4340911c6329c4f8ab0832cc1 Data Result of Liftoff annotation transfer from Nipponbare (IRGSP).
Os117425RS1_named_unmappeddb.txt Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 35.4 KB - MD5: 1522443fb9f6f2b75b7d11f505e9da93 Data File produced by Liftoff during annotation transfer.
Os117425RS1_named_unmapped.txt Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Plain Text - 35.4 KB - MD5: d6872b91cdbfcf903bec188b3ed5f808 Data File produced by Liftoff during annotation transfer.
Os125619RS1.gff Mar 10, 2025 - Output from the analysis described in GrAnnoT paper Unknown - 105.7 MB - MD5: d77e1b53493285321893fcab69264297 Data Result of GrAnnoT annotation transfer from Nipponbare (IRGSP).

liftoff_transfer_chm13_to_grch38.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 160.9 MB -

Data

Result of the human Chr1 annotation transfer by Liftoff

liftoff_transfer_k12_to_0127.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 2.8 MB -

Data

Result of the E.coli annotation transfer by Liftoff.

O127_H6_E2348_69_193637c.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 2.1 MB -

Data

Result of the E.coli annotation transfer by GrAnnoT.

odgi_transfer_nb_azu.bed

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

PLINK Binary - 187.8 MB -

Data

Result of the ODGI transfer between Nipponbare and AzucenaRS1 through the pangenome graph.

Os117425RS1.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 113.3 MB -

Data

Result of GrAnnoT annotation transfer from Nipponbare (IRGSP).

Os117425RS1_named.db.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 115.4 MB -

Data

Result of Liftoff annotation transfer from Nipponbare (IRGSP), in database mode.

Os117425RS1_named.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 115.4 MB -

Data

Result of Liftoff annotation transfer from Nipponbare (IRGSP).

Os117425RS1_named_unmappeddb.txt

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 35.4 KB -

Data

File produced by Liftoff during annotation transfer.

Os117425RS1_named_unmapped.txt

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Plain Text - 35.4 KB -

Data

File produced by Liftoff during annotation transfer.

Os125619RS1.gff

Mar 10, 2025 - Output from the analysis described in GrAnnoT paper

Unknown - 105.7 MB -

Data

Result of GrAnnoT annotation transfer from Nipponbare (IRGSP).

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