DIversity - Adaptation - plant DEvelopment

The DIADE Research Unit aims to understand the diversification of tropical plants, one of the main original reservoirs of biodiversity, and for which conservation, management and exploitation are an important issue for Sustainable Development.

The nine teams forming the Unit belong to IRD, University of Montpellier, CIRAD, and CNRS.
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531 to 540 of 1,109 Results
CulebrONT_REPORT_Data-Xoo-sub.zip
Aug 18, 2022 - Test data, reports and documentation for CulebrONT software: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
ZIP Archive - 27.0 MB - MD5: 063d9231f2ccd8e571191ab2c2ef503d
DataDocumentation
Final report generated by CulebrONT software using the test dataset Data-Xoo-sub.zip
CulebrONT_REPORTS.zip
Aug 18, 2022 - Test data, reports and documentation for CulebrONT software: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
ZIP Archive - 813.6 MB - MD5: 595aa262a2ffcd91fb88d785cd3fa4dc
DataDocumentation
Reports generated by the CulebrONT software with data from different organisms (rice, nematoda, bacteria) as described in the PCJ manuscript
DYNADIV Team(UMR DIADE)
DYNADIV Team logo
Jun 9, 2022
The main focus of DYNADIV Team is tounderstand how biodiversity of tropical plants is shaped through evolutionary forces resulting from human and environmental impacts. Its activity is essentially based on population genetics but also integrates a multidisciplinary approach inclu...
InpactorDB_non-redundant_V2.format.fasta
Feb 1, 2021 - Fasta files for InpactorDB: A Plant classified lineage-level LTR retrotransposon reference library for free-alignment methods based on Machine Learning
Unknown - 564.5 MB - MD5: e7d6bb2820ebf82252f7f39a4f583641
Data
Fasta file for InpactorDB V2. NON-redundant database of LTR retrotransposons.
InpactorDB_redundant_V2_format.fasta.zip
Feb 1, 2021 - Fasta files for InpactorDB: A Plant classified lineage-level LTR retrotransposon reference library for free-alignment methods based on Machine Learning
ZIP Archive - 292.5 MB - MD5: 9f7291811eedd0b03d410035f24ae59c
Data
Fasta file for InpactorDB V2. Redundant database of LTR retrotransposons.
Racine2_2_V10.xlsm
Sep 18, 2020 - Racine 2.2
MS Excel Spreadsheet - 5.0 MB - MD5: 8012ce30b4ca5df89866f219664916cc
Code
Application (runs in MS.Excel)
AQP_PgPIP1-1.pdb
Sep 2, 2020 - Aquaporins in Pearl Millet: genomic, coding and protein sequences
chemical/x-pdb - 165.3 KB - MD5: e25597696c37b79fd9c4e96d8c318e98
Data
Protein data bank file for Plasma Membrane Intrinsic Protein 1-1 from pearl millet
AQP_PgPIP1-3.pdb
Sep 2, 2020 - Aquaporins in Pearl Millet: genomic, coding and protein sequences
chemical/x-pdb - 163.9 KB - MD5: 6c7b3408aed3bf5532a5185c472a8404
Data
Protein data bank file for Plasma Membrane Intrinsic Protein 1-3 from pearl millet
AQP_PgPIP1-4.pdb
Sep 2, 2020 - Aquaporins in Pearl Millet: genomic, coding and protein sequences
chemical/x-pdb - 159.1 KB - MD5: 5f59cd505e34ea0be0cca8aa280c1034
Data
Protein data bank file for Plasma Membrane Intrinsic Protein 1-4 from pearl millet
AQP_PgPIP2-1.pdb
Sep 2, 2020 - Aquaporins in Pearl Millet: genomic, coding and protein sequences
chemical/x-pdb - 156.9 KB - MD5: 7c8a59c3151e0e419a88789a82ba3033
Data
Protein data bank file for Plasma Membrane Intrinsic Protein 2-1 from pearl millet
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