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L’entrepôt de données DataSuds propose aux scientifiques de l’IRD et à leurs partenaires un service pour préserver, diffuser et valoriser leurs données de recherche en facilitant leur identification, leur référencement et leur citation. En tant que plateforme de publication de données, il constitue l'un des éléments du dispositif de la Science Ouverte pour le Sud que promeut l’IRD.

 Comment publier un jeu de données (dataset) dans DataSuds ?
          → Support utilisateurs : demander l'accès à une collection existante (laboratoire, équipe, projet) ou la création d'une nouvelle collection.    → Mode d'emploi
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211 to 220 of 9,410 Results
Viroseek_downstream_analysis.Rmd
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
R Notebook - 26.7 KB - MD5: 5388991cf49f2d17c247556d77e1860e
Code
Rmarkdown for downstream analysis
nextflow.config
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Unknown - 4.9 KB - MD5: 538bb795c3b1d2357fb0b8d3eb09bd1a
Code
Configuration file for ViroSeek Nextflow execution.
ViroSeek.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 14.9 KB - MD5: d6ab166a9087903150a31e61072a1e08
Code
Nextflow pipeline script for ViroSeek.
ViroSeek_installation.txt
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Plain Text - 4.1 KB - MD5: a1d94219484866a57a948d13881802b9
Documentation
Installation instructions for ViroSeek.
ViroSeek_use.txt
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Plain Text - 3.7 KB - MD5: a227c3711141ee2641eacea0422e3066
Documentation
Tutorial for running ViroSeek pipeline.
bash.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 2.4 KB - MD5: 000890f8685ca18eac744416df40240e
Code
Modules for ViroSeek
bbmap.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 693 B - MD5: e8fa0db631cf655672f252ca01ef8789
Code
Modules for ViroSeek
bioawk.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 655 B - MD5: 76915c2d9c8fc0265abb386b301e7c73
Code
Modules for ViroSeek
diamond.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 609 B - MD5: 2f3f68a8fbdf184b809440c61df968ef
Code
Modules for ViroSeek
fastp.nf
Mar 4, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 1.0 KB - MD5: 954846bb0b0e5e86f08b763401828ef2
Code
Modules for ViroSeek
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