Metrics
158,870 Downloads
Contact Share
L’entrepôt de données DataSuds propose aux scientifiques de l’IRD et à leurs partenaires un service pour préserver, diffuser et valoriser leurs données de recherche en facilitant leur identification, leur référencement et leur citation. En tant que plateforme de publication de données, il constitue l'un des éléments du dispositif de la Science Ouverte pour le Sud que promeut l’IRD.

 Comment publier un jeu de données (dataset) dans DataSuds ?
          → Support utilisateurs : demander l'accès à une collection existante (laboratoire, équipe, projet) ou la création d'une nouvelle collection.    → Mode d'emploi
Featured Dataverses

In order to use this feature you must have at least one published or linked dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

Advanced Search

41 to 50 of 8,502 Results
GranPa Source Code(IRD - Institut de Recherche pour le Développement)
Jul 30, 2026GranPA
GranPA(IRD - Institut de Recherche pour le Développement)
Jul 30, 2026PANEEC Team
This dataverse contains the data, codes and command lines used for the GranPA v1 article
ReadMe.txt
Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Plain Text - 3.0 KB - MD5: f7a1adcb8164f01c0df6bdd70a6915e5
Documentation
contains information for understanding the dataset, including a list of each file deposited and its role, in relation to the structure of the files within this repository.
Viralmetagenome.sh
Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Shell Script - 308 B - MD5: 4df3fc615e6542de1cab355a3c856fd2
Code
Viralmetagenome command script.
Viralmetagenome_input.tab
Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Tabular Data - 658 B - 3 Variables, 5 Observations - UNF:6:jTmqDDNM4j3t0aAGiilaCA==
Données
Viralmetagenome samples input file, companion file of Viralmetagenome.sh.
compile2.py
Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Python Source Code - 3.7 KB - MD5: d35404f2eff0237f1839c10fdfeac401
Code
Script for summarising for each taxonomic assignment
Viroseek_downstream_analysis2.0.Rmd
Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
R Notebook - 84.3 KB - MD5: 4223f5eada029a205c9b71ebccf8d192
Code
Rmarkdown for downstream analysis
nextflow.config
Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Unknown - 5.1 KB - MD5: cc93bbd9ed8fb4dac49680bf3e72b6fd
Code
Configuration file for ViroSeek Nextflow execution.
ViroSeek.nf
Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Nextflow Script - 19.0 KB - MD5: bb066b58a76dc650fbac505c952367ea
Code
Nextflow pipeline script for ViroSeek.
ViroSeek_installation.txt
Jul 28, 2026 - Replication Data and Scripts : ViroSeek a viral detection pipeline for second-generation sequencing
Plain Text - 3.3 KB - MD5: f5897ee7f60af645bc78c137f81219c2
Documentation
Installation instructions for ViroSeek.
Add Data

Log in to create a dataverse or add a dataset.

Log In
Share Dataverse

Share this dataverse on your favorite social media networks.

Link Dataverse
Reset Modifications

Are you sure you want to reset the selected metadata fields? If you do this, any customizations (hidden, required, optional) you have done will no longer appear.